EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018141 (Gene tree)
Gene ID: -
Gene Symbol: Aff4
Alias: AF5Q31|Alf4|Laf4l|MCEF
Full Name: AF4/FMR2 family%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 87357 bases
Position: chr11:58209295-58296651
Accession: 2136171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0028787	AF-4	PF05110.13	0	1	1
MGP_NODShiLtJ_P0028788	AF-4	PF05110.13	3.7e-47	1	1
MGP_NODShiLtJ_P0028791	AF-4	PF05110.13	6.5e-39	1	2
MGP_NODShiLtJ_P0028791	AF-4	PF05110.13	6.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0028788	-	464	-	MGP_NODShiLtJ_P0028788	122 (aa)	-	-
MGP_NODShiLtJ_T0028789	-	3818	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028787	-	10107	XM_006534560	MGP_NODShiLtJ_P0028787	1160 (aa)	XP_006534623	Q9ESC8
MGP_NODShiLtJ_T0028791	-	476	-	MGP_NODShiLtJ_P0028791	158 (aa)	-	-
MGP_NODShiLtJ_T0028790	-	600	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028793	-	687	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028792	-	429	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028794	-	933	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018141	Aff4	74	57.143	MGP_NODShiLtJ_G0015816	Aff3	83	35.742
MGP_NODShiLtJ_G0018141	Aff4	94	54.074	MGP_NODShiLtJ_G0035561	Aff2	64	53.160