EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018202 (Gene tree)
Gene ID: -
Gene Symbol: Zfp672
Alias: 4930488P06Rik|4930511N19Rik|Znf672
Full Name: zinc finger protein 672
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 15231 bases
Position: chr11:63652031-63667261
Accession: 2442105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_NODShiLtJ_P0029013	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_NODShiLtJ_P0029014	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_NODShiLtJ_P0029015	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_NODShiLtJ_P0029016	zf-C2H2	PF00096.26	2.6e-10	1	2
MGP_NODShiLtJ_P0029016	zf-C2H2	PF00096.26	2.6e-10	2	2
MGP_NODShiLtJ_P0029013	zf-met	PF12874.7	0.00068	1	1
MGP_NODShiLtJ_P0029014	zf-met	PF12874.7	0.00068	1	1
MGP_NODShiLtJ_P0029015	zf-met	PF12874.7	0.00068	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0029013	-	2764	XM_006533520	MGP_NODShiLtJ_P0029013	468 (aa)	XP_006533583	Q99LH4
MGP_NODShiLtJ_T0029015	-	3094	-	MGP_NODShiLtJ_P0029015	468 (aa)	-	-
MGP_NODShiLtJ_T0029014	-	2861	-	MGP_NODShiLtJ_P0029014	468 (aa)	-	-
MGP_NODShiLtJ_T0029017	-	839	-	MGP_NODShiLtJ_P0029017	55 (aa)	-	-
MGP_NODShiLtJ_T0029016	-	698	-	MGP_NODShiLtJ_P0029016	89 (aa)	-	-
MGP_NODShiLtJ_T0029019	-	423	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0029018	-	426	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0029020	-	3129	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0029021	-	2624	-	MGP_NODShiLtJ_P0029021	117 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0018202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018202	Zfp672	97	41.250	MGP_NODShiLtJ_G0030984	Zfp637	98	48.810
MGP_NODShiLtJ_G0018202	Zfp672	99	42.500	MGP_NODShiLtJ_G0026710	Zfp334	67	47.222
MGP_NODShiLtJ_G0018202	Zfp672	93	43.662	MGP_NODShiLtJ_G0031667	Zfp574	93	41.667
MGP_NODShiLtJ_G0018202	Zfp672	90	40.000	MGP_NODShiLtJ_G0028853	Zbtb17	59	36.986
MGP_NODShiLtJ_G0018202	Zfp672	89	49.206	MGP_NODShiLtJ_G0031379	Zfp628	60	49.206
MGP_NODShiLtJ_G0018202	Zfp672	92	40.000	MGP_NODShiLtJ_G0023070	Zfp945	98	37.872
MGP_NODShiLtJ_G0018202	Zfp672	100	42.857	MGP_NODShiLtJ_G0023077	Zscan10	76	37.631
MGP_NODShiLtJ_G0018202	Zfp672	86	44.286	MGP_NODShiLtJ_G0030639	Prdm5	88	42.857
MGP_NODShiLtJ_G0018202	Zfp672	90	48.276	MGP_NODShiLtJ_G0029645	Gfi1	51	48.276
MGP_NODShiLtJ_G0018202	Zfp672	90	46.559	MGP_NODShiLtJ_G0033947	Zfp1	67	46.559
MGP_NODShiLtJ_G0018202	Zfp672	90	41.026	MGP_NODShiLtJ_G0033575	Zfp882	86	37.164
MGP_NODShiLtJ_G0018202	Zfp672	92	42.857	MGP_NODShiLtJ_G0021849	Zfp251	69	46.372
MGP_NODShiLtJ_G0018202	Zfp672	92	39.785	MGP_NODShiLtJ_G0031387	Zfp865	79	38.431
MGP_NODShiLtJ_G0018202	Zfp672	99	39.773	MGP_NODShiLtJ_G0020539	Rslcan18	65	45.627
MGP_NODShiLtJ_G0018202	Zfp672	93	44.156	MGP_NODShiLtJ_G0034217	Zfp26	79	42.476
MGP_NODShiLtJ_G0018202	Zfp672	93	41.509	MGP_NODShiLtJ_G0018837	Zfp652	52	37.931
MGP_NODShiLtJ_G0018202	Zfp672	89	43.407	MGP_NODShiLtJ_G0032842	9130019O22Rik	70	40.511
MGP_NODShiLtJ_G0018202	Zfp672	90	42.105	MGP_NODShiLtJ_G0032843	-	61	42.798
MGP_NODShiLtJ_G0018202	Zfp672	89	52.915	MGP_NODShiLtJ_G0032840	Zfp768	51	52.915
MGP_NODShiLtJ_G0018202	Zfp672	90	43.750	MGP_NODShiLtJ_G0031629	Zfp112	59	46.212
MGP_NODShiLtJ_G0018202	Zfp672	96	48.214	MGP_NODShiLtJ_G0029310	Zbtb49	78	47.143
MGP_NODShiLtJ_G0018202	Zfp672	100	39.241	MGP_NODShiLtJ_G0020540	Zfp759	88	39.286
MGP_NODShiLtJ_G0018202	Zfp672	91	47.009	MGP_NODShiLtJ_G0024432	Zfp236	79	36.471
MGP_NODShiLtJ_G0018202	Zfp672	89	41.951	MGP_NODShiLtJ_G0026748	Zfp64	73	38.806
MGP_NODShiLtJ_G0018202	Zfp672	99	41.250	MGP_NODShiLtJ_G0031634	Zfp108	68	46.352
MGP_NODShiLtJ_G0018202	Zfp672	99	42.500	MGP_NODShiLtJ_G0031637	Zfp94	67	47.959
MGP_NODShiLtJ_G0018202	Zfp672	99	42.500	MGP_NODShiLtJ_G0031630	Zfp235	64	41.667
MGP_NODShiLtJ_G0018202	Zfp672	100	38.554	MGP_NODShiLtJ_G0026280	Zfp661	63	42.910
MGP_NODShiLtJ_G0018202	Zfp672	99	40.000	MGP_NODShiLtJ_G0023048	Zfp677	82	38.983
MGP_NODShiLtJ_G0018202	Zfp672	100	41.975	MGP_NODShiLtJ_G0020128	Zkscan4	53	45.852
MGP_NODShiLtJ_G0018202	Zfp672	90	42.029	MGP_NODShiLtJ_G0018107	Zfp454	68	38.320
MGP_NODShiLtJ_G0018202	Zfp672	90	38.750	MGP_NODShiLtJ_G0022379	Snai2	55	38.750
MGP_NODShiLtJ_G0018202	Zfp672	99	40.000	MGP_NODShiLtJ_G0020555	Zfp748	93	38.386
MGP_NODShiLtJ_G0018202	Zfp672	93	38.462	MGP_NODShiLtJ_G0033787	Zfp319	91	32.410
MGP_NODShiLtJ_G0018202	Zfp672	96	42.254	MGP_NODShiLtJ_G0031938	Zfp715	71	38.835
MGP_NODShiLtJ_G0018202	Zfp672	90	42.373	MGP_NODShiLtJ_G0023056	Gm10226	100	50.000
MGP_NODShiLtJ_G0018202	Zfp672	92	41.250	MGP_NODShiLtJ_G0023050	Zfp51	82	41.505
MGP_NODShiLtJ_G0018202	Zfp672	89	49.524	MGP_NODShiLtJ_G0031804	Zfp420	98	49.524
MGP_NODShiLtJ_G0018202	Zfp672	92	41.250	MGP_NODShiLtJ_G0030504	Repin1	91	35.831
MGP_NODShiLtJ_G0018202	Zfp672	90	42.105	MGP_NODShiLtJ_G0032844	E430018J23Rik	61	42.798
MGP_NODShiLtJ_G0018202	Zfp672	93	42.500	MGP_NODShiLtJ_G0018250	Zfp867	92	47.449