EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018712 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 20961 bases
Position: chr11:91844975-91865935
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0031074	ResIII	PF04851.15	9.8e-06	1	1
MGP_NODShiLtJ_P0031074	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0031074	-	3194	-	MGP_NODShiLtJ_P0031074	598 (aa)	-	Q8K301
MGP_NODShiLtJ_T0031075	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0018712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018712	Ddx52	68	39.683	MGP_NODShiLtJ_G0016284	Ddx18	57	48.148
MGP_NODShiLtJ_G0018712	Ddx52	58	33.428	MGP_NODShiLtJ_G0031223	Ddx47	83	32.011
MGP_NODShiLtJ_G0018712	Ddx52	66	32.530	MGP_NODShiLtJ_G0016790	D1Pas1	61	32.530
MGP_NODShiLtJ_G0018712	Ddx52	68	30.456	MGP_NODShiLtJ_G0021907	Ddx17	62	30.843
MGP_NODShiLtJ_G0018712	Ddx52	61	30.597	MGP_NODShiLtJ_G0017875	Ddx56	80	33.493
MGP_NODShiLtJ_G0018712	Ddx52	60	32.044	MGP_NODShiLtJ_G0022507	Eif4a2	90	30.240
MGP_NODShiLtJ_G0018712	Ddx52	66	34.069	MGP_NODShiLtJ_G0020774	Ddx4	57	34.069
MGP_NODShiLtJ_G0018712	Ddx52	70	30.222	MGP_NODShiLtJ_G0022133	Ddx23	54	30.243
MGP_NODShiLtJ_G0018712	Ddx52	68	30.733	MGP_NODShiLtJ_G0020442	Ddx41	65	31.026
MGP_NODShiLtJ_G0018712	Ddx52	60	41.071	MGP_NODShiLtJ_G0019462	Ddx1	55	41.071
MGP_NODShiLtJ_G0018712	Ddx52	73	32.648	MGP_NODShiLtJ_G0016413	Ddx59	64	33.741
MGP_NODShiLtJ_G0018712	Ddx52	70	32.045	MGP_NODShiLtJ_G0035370	Ddx3x	61	32.530
MGP_NODShiLtJ_G0018712	Ddx52	58	30.900	MGP_NODShiLtJ_G0029692	Ddx51	64	30.900
MGP_NODShiLtJ_G0018712	Ddx52	66	30.958	MGP_NODShiLtJ_G0019166	Ddx5	77	30.958
MGP_NODShiLtJ_G0018712	Ddx52	62	30.750	MGP_NODShiLtJ_G0029900	Ddx55	61	30.750
MGP_NODShiLtJ_G0018712	Ddx52	60	31.768	MGP_NODShiLtJ_G0018394	Eif4a1	87	31.768
MGP_NODShiLtJ_G0018712	Ddx52	63	31.915	MGP_NODShiLtJ_G0034513	Ddx6	76	31.915
MGP_NODShiLtJ_G0018712	Ddx52	69	34.135	MGP_NODShiLtJ_G0034865	Ddx43	63	34.135
MGP_NODShiLtJ_G0018712	Ddx52	61	30.081	MGP_NODShiLtJ_G0033504	Ddx49	76	30.081