EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0018769 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 7587 bases
Position: chr11:96397439-96405025
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0031333	RRM_1	PF00076.22	6.2e-34	1	2
MGP_NODShiLtJ_P0031333	RRM_1	PF00076.22	6.2e-34	2	2
MGP_NODShiLtJ_P0031332	RRM_1	PF00076.22	2.4e-33	1	2
MGP_NODShiLtJ_P0031332	RRM_1	PF00076.22	2.4e-33	2	2
MGP_NODShiLtJ_P0031335	RRM_1	PF00076.22	2.6e-33	1	2
MGP_NODShiLtJ_P0031335	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0031333	-	2949	-	MGP_NODShiLtJ_P0031333	201 (aa)	-	-
MGP_NODShiLtJ_T0031332	-	5359	-	MGP_NODShiLtJ_P0031332	248 (aa)	-	Q6PDM2
MGP_NODShiLtJ_T0031335	-	1209	-	MGP_NODShiLtJ_P0031335	253 (aa)	-	-
MGP_NODShiLtJ_T0031334	-	648	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0031337	-	401	-	MGP_NODShiLtJ_P0031337	57 (aa)	-	-
MGP_NODShiLtJ_T0031336	-	895	-	MGP_NODShiLtJ_P0031336	105 (aa)	-	-
MGP_NODShiLtJ_T0031338	-	758	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018769	Srsf1	80	46.988	MGP_NODShiLtJ_G0019749	Srsf5	96	51.020
MGP_NODShiLtJ_G0018769	Srsf1	79	79.762	MGP_NODShiLtJ_G0029765	Srsf9	73	70.330
MGP_NODShiLtJ_G0018769	Srsf1	82	42.857	MGP_NODShiLtJ_G0026633	Srsf6	58	40.670