EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018774 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 396958 bases
Position: chr11:96721229-97118186
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0031354	RRM_1	PF00076.22	6.3e-34	1	2
MGP_NODShiLtJ_P0031354	RRM_1	PF00076.22	6.3e-34	2	2
MGP_NODShiLtJ_P0031355	RRM_1	PF00076.22	6.5e-34	1	2
MGP_NODShiLtJ_P0031355	RRM_1	PF00076.22	6.5e-34	2	2
MGP_NODShiLtJ_P0031358	RRM_1	PF00076.22	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0031357	-	2538	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0031356	-	1749	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0031355	-	1857	-	MGP_NODShiLtJ_P0031355	346 (aa)	-	-
MGP_NODShiLtJ_T0031354	-	6346	XM_006534432	MGP_NODShiLtJ_P0031354	328 (aa)	XP_006534495	Q920Q6
MGP_NODShiLtJ_T0031358	-	405	-	MGP_NODShiLtJ_P0031358	113 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0018774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018774	Msi2	100	53.097	MGP_NODShiLtJ_G0029581	Hnrnpd	100	72.000
MGP_NODShiLtJ_G0018774	Msi2	100	54.867	MGP_NODShiLtJ_G0029583	Hnrnpdl	78	41.634
MGP_NODShiLtJ_G0018774	Msi2	61	42.857	MGP_NODShiLtJ_G0035535	Rbmx	88	45.205
MGP_NODShiLtJ_G0018774	Msi2	61	42.857	MGP_NODShiLtJ_G0035337	Rbm3	82	43.243
MGP_NODShiLtJ_G0018774	Msi2	70	31.250	MGP_NODShiLtJ_G0028254	Elavl2	72	32.632
MGP_NODShiLtJ_G0018774	Msi2	100	44.348	MGP_NODShiLtJ_G0030538	Hnrnpa2b1	56	44.348
MGP_NODShiLtJ_G0018774	Msi2	100	35.398	MGP_NODShiLtJ_G0028933	Tardbp	79	31.818
MGP_NODShiLtJ_G0018774	Msi2	100	90.323	MGP_NODShiLtJ_G0029769	Msi1	99	75.665
MGP_NODShiLtJ_G0018774	Msi2	61	41.429	MGP_NODShiLtJ_G0017347	Cirbp	88	43.243
MGP_NODShiLtJ_G0018774	Msi2	50	33.333	MGP_NODShiLtJ_G0015900	Boll	65	32.857
MGP_NODShiLtJ_G0018774	Msi2	99	41.228	MGP_NODShiLtJ_G0020467	Hnrnpa0	59	41.989
MGP_NODShiLtJ_G0018774	Msi2	100	52.212	MGP_NODShiLtJ_G0018120	Hnrnpab	70	48.039
MGP_NODShiLtJ_G0018774	Msi2	60	33.824	MGP_NODShiLtJ_G0019842	Slirp	70	33.824
MGP_NODShiLtJ_G0018774	Msi2	73	37.349	MGP_NODShiLtJ_G0026770	Rbm38	70	38.095
MGP_NODShiLtJ_G0018774	Msi2	84	30.208	MGP_NODShiLtJ_G0028383	Elavl4	78	30.088
MGP_NODShiLtJ_G0018774	Msi2	99	42.400	MGP_NODShiLtJ_G0017353	Dazap1	98	42.857