EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018837 (Gene tree)
Gene ID: -
Gene Symbol: Zfp652
Alias: 9530033F24Rik|ZNF652
Full Name: zinc finger protein 652
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 135810 bases
Position: chr11:105162427-105298236
Accession: 2442221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0031606	zf-C2H2	PF00096.26	1.7e-35	1	4
MGP_NODShiLtJ_P0031606	zf-C2H2	PF00096.26	1.7e-35	2	4
MGP_NODShiLtJ_P0031606	zf-C2H2	PF00096.26	1.7e-35	3	4
MGP_NODShiLtJ_P0031606	zf-C2H2	PF00096.26	1.7e-35	4	4
MGP_NODShiLtJ_P0031610	zf-C2H2	PF00096.26	1.7e-35	1	4
MGP_NODShiLtJ_P0031610	zf-C2H2	PF00096.26	1.7e-35	2	4
MGP_NODShiLtJ_P0031610	zf-C2H2	PF00096.26	1.7e-35	3	4
MGP_NODShiLtJ_P0031610	zf-C2H2	PF00096.26	1.7e-35	4	4
MGP_NODShiLtJ_P0031606	zf-met	PF12874.7	1.4e-10	1	2
MGP_NODShiLtJ_P0031606	zf-met	PF12874.7	1.4e-10	2	2
MGP_NODShiLtJ_P0031610	zf-met	PF12874.7	1.4e-10	1	2
MGP_NODShiLtJ_P0031610	zf-met	PF12874.7	1.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0031609	-	3982	-	MGP_NODShiLtJ_P0031609	428 (aa)	-	-
MGP_NODShiLtJ_T0031610	-	2663	-	MGP_NODShiLtJ_P0031610	608 (aa)	-	-
MGP_NODShiLtJ_T0031607	-	6541	-	MGP_NODShiLtJ_P0031607	451 (aa)	-	-
MGP_NODShiLtJ_T0031606	-	10432	-	MGP_NODShiLtJ_P0031606	608 (aa)	-	Q5DU09

Gene Model

Click here to download MGP_NODShiLtJ_G0018837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018837	Zfp652	52	32.275	MGP_NODShiLtJ_G0026280	Zfp661	60	44.304
MGP_NODShiLtJ_G0018837	Zfp652	61	37.696	MGP_NODShiLtJ_G0023077	Zscan10	79	37.696
MGP_NODShiLtJ_G0018837	Zfp652	70	37.037	MGP_NODShiLtJ_G0023070	Zfp945	77	35.628
MGP_NODShiLtJ_G0018837	Zfp652	51	32.808	MGP_NODShiLtJ_G0032844	E430018J23Rik	54	38.421
MGP_NODShiLtJ_G0018837	Zfp652	51	32.808	MGP_NODShiLtJ_G0032843	-	54	38.421
MGP_NODShiLtJ_G0018837	Zfp652	61	37.895	MGP_NODShiLtJ_G0020540	Zfp759	94	37.895
MGP_NODShiLtJ_G0018837	Zfp652	56	38.596	MGP_NODShiLtJ_G0018107	Zfp454	69	39.130
MGP_NODShiLtJ_G0018837	Zfp652	50	41.176	MGP_NODShiLtJ_G0031938	Zfp715	66	41.176
MGP_NODShiLtJ_G0018837	Zfp652	53	38.095	MGP_NODShiLtJ_G0031667	Zfp574	60	37.037
MGP_NODShiLtJ_G0018837	Zfp652	50	37.089	MGP_NODShiLtJ_G0030984	Zfp637	78	37.089
MGP_NODShiLtJ_G0018837	Zfp652	82	33.562	MGP_NODShiLtJ_G0026710	Zfp334	68	39.355
MGP_NODShiLtJ_G0018837	Zfp652	65	36.154	MGP_NODShiLtJ_G0031387	Zfp865	79	37.895
MGP_NODShiLtJ_G0018837	Zfp652	51	38.298	MGP_NODShiLtJ_G0018250	Zfp867	82	38.298
MGP_NODShiLtJ_G0018837	Zfp652	50	36.747	MGP_NODShiLtJ_G0026748	Zfp64	72	31.553
MGP_NODShiLtJ_G0018837	Zfp652	73	41.250	MGP_NODShiLtJ_G0030504	Repin1	98	41.250
MGP_NODShiLtJ_G0018837	Zfp652	57	42.593	MGP_NODShiLtJ_G0029310	Zbtb49	62	45.205
MGP_NODShiLtJ_G0018837	Zfp652	52	37.931	MGP_NODShiLtJ_G0018202	Zfp672	93	41.509
MGP_NODShiLtJ_G0018837	Zfp652	60	41.748	MGP_NODShiLtJ_G0024432	Zfp236	59	41.748
MGP_NODShiLtJ_G0018837	Zfp652	51	34.239	MGP_NODShiLtJ_G0020539	Rslcan18	66	42.202
MGP_NODShiLtJ_G0018837	Zfp652	89	75.600	MGP_NODShiLtJ_G0035247	Zfp651	80	82.594