EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0019166 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 10773 bases
Position: chr11:117459404-117470176
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0032880	DEAD	PF00270.29	2.2e-47	1	1
MGP_NODShiLtJ_P0032886	DEAD	PF00270.29	1.6e-15	1	1
MGP_NODShiLtJ_P0032887	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0032886	-	861	-	MGP_NODShiLtJ_P0032886	182 (aa)	-	-
MGP_NODShiLtJ_T0032887	-	831	-	MGP_NODShiLtJ_P0032887	167 (aa)	-	-
MGP_NODShiLtJ_T0032884	-	708	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0032885	-	810	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0032882	-	542	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0032883	-	496	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0032880	-	3111	XM_006532135	MGP_NODShiLtJ_P0032880	509 (aa)	XP_006532198	B1ARB9
MGP_NODShiLtJ_T0032881	-	3153	-	MGP_NODShiLtJ_P0032881	406 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0019166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0019166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0019166	Ddx5	81	37.941	MGP_NODShiLtJ_G0020442	Ddx41	64	38.916
MGP_NODShiLtJ_G0019166	Ddx5	77	30.958	MGP_NODShiLtJ_G0018712	Ddx52	66	30.958
MGP_NODShiLtJ_G0019166	Ddx5	78	31.193	MGP_NODShiLtJ_G0018394	Eif4a1	89	32.540
MGP_NODShiLtJ_G0019166	Ddx5	72	33.110	MGP_NODShiLtJ_G0019335	Eif4a3	82	34.857
MGP_NODShiLtJ_G0019166	Ddx5	89	43.968	MGP_NODShiLtJ_G0034865	Ddx43	68	43.624
MGP_NODShiLtJ_G0019166	Ddx5	72	31.379	MGP_NODShiLtJ_G0016284	Ddx18	54	32.915
MGP_NODShiLtJ_G0019166	Ddx5	71	35.676	MGP_NODShiLtJ_G0033504	Ddx49	91	36.826
MGP_NODShiLtJ_G0019166	Ddx5	86	32.857	MGP_NODShiLtJ_G0016413	Ddx59	66	33.094
MGP_NODShiLtJ_G0019166	Ddx5	73	30.070	MGP_NODShiLtJ_G0025371	Ddx31	56	31.313
MGP_NODShiLtJ_G0019166	Ddx5	93	82.275	MGP_NODShiLtJ_G0021907	Ddx17	72	81.356
MGP_NODShiLtJ_G0019166	Ddx5	70	33.446	MGP_NODShiLtJ_G0017163	Ddx50	51	34.302
MGP_NODShiLtJ_G0019166	Ddx5	71	37.457	MGP_NODShiLtJ_G0031223	Ddx47	80	37.389
MGP_NODShiLtJ_G0019166	Ddx5	66	30.618	MGP_NODShiLtJ_G0029900	Ddx55	56	30.618
MGP_NODShiLtJ_G0019166	Ddx5	72	31.333	MGP_NODShiLtJ_G0034335	Ddx25	69	33.237
MGP_NODShiLtJ_G0019166	Ddx5	80	41.935	MGP_NODShiLtJ_G0035370	Ddx3x	61	42.787
MGP_NODShiLtJ_G0019166	Ddx5	78	31.804	MGP_NODShiLtJ_G0022507	Eif4a2	92	33.429
MGP_NODShiLtJ_G0019166	Ddx5	82	41.648	MGP_NODShiLtJ_G0016790	D1Pas1	61	42.543
MGP_NODShiLtJ_G0019166	Ddx5	81	35.833	MGP_NODShiLtJ_G0022133	Ddx23	50	37.441
MGP_NODShiLtJ_G0019166	Ddx5	65	31.024	MGP_NODShiLtJ_G0034513	Ddx6	67	31.024
MGP_NODShiLtJ_G0019166	Ddx5	80	38.323	MGP_NODShiLtJ_G0020774	Ddx4	57	38.519
MGP_NODShiLtJ_G0019166	Ddx5	66	30.029	MGP_NODShiLtJ_G0023455	Ddx39b	77	30.029