EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0019305 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Plus strand
Length
114837 bases
Position
chr11:129570628-129685464
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0033568Ago_hookPF10427.91.4e-2311
MGP_NODShiLtJ_P0033570Ago_hookPF10427.91.4e-2311
MGP_NODShiLtJ_P0033571Ago_hookPF10427.91.6e-2311
MGP_NODShiLtJ_P0033571RRM_1PF00076.220.0004111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0033568-8772XM_006533109MGP_NODShiLtJ_P00335681900 (aa)XP_006533172B1ATC3
MGP_NODShiLtJ_T0033569-11584--- (aa)--
MGP_NODShiLtJ_T0033571-6611-MGP_NODShiLtJ_P00335711732 (aa)--
MGP_NODShiLtJ_T0033570-8895-MGP_NODShiLtJ_P00335701900 (aa)--
MGP_NODShiLtJ_T0033573-1829--- (aa)--
MGP_NODShiLtJ_T0033572-741--- (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0019305's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0019305's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0019305Tnrc6c9940.570MGP_NODShiLtJ_G0032767Tnrc6a9844.482
MGP_NODShiLtJ_G0019305Tnrc6c9936.215MGP_NODShiLtJ_G0021933Tnrc6b9637.290

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