EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0019749 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 5089 bases
Position: chr12:89998054-90003142
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0034985	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NODShiLtJ_P0034985	RRM_1	PF00076.22	1.7e-30	2	2
MGP_NODShiLtJ_P0034990	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NODShiLtJ_P0034990	RRM_1	PF00076.22	1.7e-30	2	2
MGP_NODShiLtJ_P0034995	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NODShiLtJ_P0034995	RRM_1	PF00076.22	1.7e-30	2	2
MGP_NODShiLtJ_P0034987	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NODShiLtJ_P0034987	RRM_1	PF00076.22	1.7e-30	2	2
MGP_NODShiLtJ_P0034989	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NODShiLtJ_P0034989	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0034995	-	1571	-	MGP_NODShiLtJ_P0034995	269 (aa)	-	-
MGP_NODShiLtJ_T0034996	-	3485	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0034994	-	489	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0034989	-	1501	-	MGP_NODShiLtJ_P0034989	270 (aa)	-	-
MGP_NODShiLtJ_T0034988	-	2723	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0034985	-	1530	XM_006515629	MGP_NODShiLtJ_P0034985	269 (aa)	XP_006515692	O35326
MGP_NODShiLtJ_T0034987	-	1513	-	MGP_NODShiLtJ_P0034987	270 (aa)	-	-
MGP_NODShiLtJ_T0034986	-	2943	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0034992	-	886	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0034993	-	547	-	MGP_NODShiLtJ_P0034993	46 (aa)	-	-
MGP_NODShiLtJ_T0034990	-	1494	-	MGP_NODShiLtJ_P0034990	269 (aa)	-	-
MGP_NODShiLtJ_T0034991	-	538	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0019749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0019749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0019749	Srsf5	89	48.780	MGP_NODShiLtJ_G0029765	Srsf9	63	39.394
MGP_NODShiLtJ_G0019749	Srsf5	89	63.415	MGP_NODShiLtJ_G0026633	Srsf6	50	71.642
MGP_NODShiLtJ_G0019749	Srsf5	96	51.020	MGP_NODShiLtJ_G0018769	Srsf1	80	46.988