EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0019842 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 6038 bases
Position: chr12:97138196-97144233
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0035328	RRM_1	PF00076.22	4.1e-14	1	1
MGP_NODShiLtJ_P0035327	RRM_1	PF00076.22	8.8e-14	1	1
MGP_NODShiLtJ_P0035329	RRM_1	PF00076.22	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0035327	-	802	-	MGP_NODShiLtJ_P0035327	99 (aa)	-	Q9D8T7
MGP_NODShiLtJ_T0035328	-	339	-	MGP_NODShiLtJ_P0035328	112 (aa)	-	-
MGP_NODShiLtJ_T0035329	-	335	-	MGP_NODShiLtJ_P0035329	102 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0019842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0019842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0019842	Slirp	78	33.846	MGP_NODShiLtJ_G0017353	Dazap1	89	33.846
MGP_NODShiLtJ_G0019842	Slirp	70	33.333	MGP_NODShiLtJ_G0029581	Hnrnpd	71	33.333
MGP_NODShiLtJ_G0019842	Slirp	73	33.846	MGP_NODShiLtJ_G0018120	Hnrnpab	51	33.846
MGP_NODShiLtJ_G0019842	Slirp	70	33.824	MGP_NODShiLtJ_G0018774	Msi2	60	33.824