EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0019996 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 99897 bases
Position: chr12:125556832-125656728
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0035797	TUDOR	PF00567.24	6.8e-15	1	1
MGP_NODShiLtJ_P0035797	DEAD	PF00270.29	1.2e-07	1	1
MGP_NODShiLtJ_P0035797	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0035797	-	4809	XM_006516316	MGP_NODShiLtJ_P0035797	1383 (aa)	XP_006516379	Q14BI7
MGP_NODShiLtJ_T0035803	-	4063	-	MGP_NODShiLtJ_P0035803	1297 (aa)	-	-
MGP_NODShiLtJ_T0035807	-	456	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0035806	-	799	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0035805	-	3366	-	MGP_NODShiLtJ_P0035805	539 (aa)	-	-
MGP_NODShiLtJ_T0035804	-	3681	-	MGP_NODShiLtJ_P0035804	216 (aa)	-	-
MGP_NODShiLtJ_T0035808	-	484	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0019996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0019996	Tdrd9	95	32.448	MGP_NODShiLtJ_G0018469	Dhx33	77	31.000
MGP_NODShiLtJ_G0019996	Tdrd9	88	30.081	MGP_NODShiLtJ_G0029346	Dhx15	71	30.081
MGP_NODShiLtJ_G0019996	Tdrd9	99	34.079	MGP_NODShiLtJ_G0027070	Dhx36	57	34.171
MGP_NODShiLtJ_G0019996	Tdrd9	89	31.417	MGP_NODShiLtJ_G0018744	Dhx40	66	30.755
MGP_NODShiLtJ_G0019996	Tdrd9	95	33.843	MGP_NODShiLtJ_G0035138	Dhx30	51	32.248