EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0020128 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 6589 bases
Position: chr13:20467118-20473706
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	1	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	2	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	3	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	4	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	5	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	6	7
MGP_NODShiLtJ_P0036166	zf-C2H2	PF00096.26	8.7e-41	7	7
MGP_NODShiLtJ_P0036166	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0036166	-	2398	-	MGP_NODShiLtJ_P0036166	477 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_NODShiLtJ_G0020128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0020128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0020128	Zkscan4	50	48.372	MGP_NODShiLtJ_G0030984	Zfp637	71	48.372
MGP_NODShiLtJ_G0020128	Zkscan4	50	52.414	MGP_NODShiLtJ_G0026710	Zfp334	68	52.414
MGP_NODShiLtJ_G0020128	Zkscan4	50	41.518	MGP_NODShiLtJ_G0028853	Zbtb17	56	41.518
MGP_NODShiLtJ_G0020128	Zkscan4	53	45.852	MGP_NODShiLtJ_G0018202	Zfp672	100	41.975
MGP_NODShiLtJ_G0020128	Zkscan4	52	47.973	MGP_NODShiLtJ_G0031379	Zfp628	63	45.238
MGP_NODShiLtJ_G0020128	Zkscan4	53	47.826	MGP_NODShiLtJ_G0030639	Prdm5	78	47.826
MGP_NODShiLtJ_G0020128	Zkscan4	53	54.491	MGP_NODShiLtJ_G0033947	Zfp1	75	54.491
MGP_NODShiLtJ_G0020128	Zkscan4	52	53.535	MGP_NODShiLtJ_G0018107	Zfp454	70	53.535
MGP_NODShiLtJ_G0020128	Zkscan4	54	47.032	MGP_NODShiLtJ_G0033575	Zfp882	85	47.032
MGP_NODShiLtJ_G0020128	Zkscan4	52	47.674	MGP_NODShiLtJ_G0024432	Zfp236	61	47.674
MGP_NODShiLtJ_G0020128	Zkscan4	53	52.000	MGP_NODShiLtJ_G0031634	Zfp108	66	52.000
MGP_NODShiLtJ_G0020128	Zkscan4	53	49.286	MGP_NODShiLtJ_G0031636	Zfp61	58	49.286
MGP_NODShiLtJ_G0020128	Zkscan4	61	46.023	MGP_NODShiLtJ_G0031637	Zfp94	72	47.137
MGP_NODShiLtJ_G0020128	Zkscan4	65	51.938	MGP_NODShiLtJ_G0031630	Zfp235	62	51.938
MGP_NODShiLtJ_G0020128	Zkscan4	51	51.695	MGP_NODShiLtJ_G0021849	Zfp251	73	48.498
MGP_NODShiLtJ_G0020128	Zkscan4	70	45.455	MGP_NODShiLtJ_G0023048	Zfp677	89	45.455
MGP_NODShiLtJ_G0020128	Zkscan4	58	46.296	MGP_NODShiLtJ_G0031387	Zfp865	78	36.199
MGP_NODShiLtJ_G0020128	Zkscan4	56	46.457	MGP_NODShiLtJ_G0020539	Rslcan18	74	45.455
MGP_NODShiLtJ_G0020128	Zkscan4	63	48.408	MGP_NODShiLtJ_G0023070	Zfp945	92	46.330
MGP_NODShiLtJ_G0020128	Zkscan4	50	49.378	MGP_NODShiLtJ_G0034217	Zfp26	79	49.378
MGP_NODShiLtJ_G0020128	Zkscan4	65	47.845	MGP_NODShiLtJ_G0031629	Zfp112	56	48.085
MGP_NODShiLtJ_G0020128	Zkscan4	54	41.949	MGP_NODShiLtJ_G0032842	9130019O22Rik	69	42.793
MGP_NODShiLtJ_G0020128	Zkscan4	54	43.363	MGP_NODShiLtJ_G0032843	-	59	41.667
MGP_NODShiLtJ_G0020128	Zkscan4	50	49.057	MGP_NODShiLtJ_G0032840	Zfp768	52	52.632
MGP_NODShiLtJ_G0020128	Zkscan4	54	43.363	MGP_NODShiLtJ_G0032844	E430018J23Rik	59	41.667
MGP_NODShiLtJ_G0020128	Zkscan4	95	49.664	MGP_NODShiLtJ_G0023077	Zscan10	98	43.564
MGP_NODShiLtJ_G0020128	Zkscan4	54	45.133	MGP_NODShiLtJ_G0031938	Zfp715	71	45.133
MGP_NODShiLtJ_G0020128	Zkscan4	67	53.289	MGP_NODShiLtJ_G0023050	Zfp51	99	53.289
MGP_NODShiLtJ_G0020128	Zkscan4	51	45.342	MGP_NODShiLtJ_G0029310	Zbtb49	66	47.222
MGP_NODShiLtJ_G0020128	Zkscan4	54	61.184	MGP_NODShiLtJ_G0031804	Zfp420	99	50.909
MGP_NODShiLtJ_G0020128	Zkscan4	54	49.091	MGP_NODShiLtJ_G0020540	Zfp759	88	45.622
MGP_NODShiLtJ_G0020128	Zkscan4	50	45.417	MGP_NODShiLtJ_G0018250	Zfp867	77	45.417
MGP_NODShiLtJ_G0020128	Zkscan4	53	37.561	MGP_NODShiLtJ_G0026748	Zfp64	70	37.561
MGP_NODShiLtJ_G0020128	Zkscan4	54	47.857	MGP_NODShiLtJ_G0030504	Repin1	95	47.857
MGP_NODShiLtJ_G0020128	Zkscan4	53	52.381	MGP_NODShiLtJ_G0031667	Zfp574	66	49.057
MGP_NODShiLtJ_G0020128	Zkscan4	53	37.229	MGP_NODShiLtJ_G0033787	Zfp319	87	37.229
MGP_NODShiLtJ_G0020128	Zkscan4	64	55.435	MGP_NODShiLtJ_G0026280	Zfp661	76	55.435