EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0020349 (Gene tree)
Gene ID: -
Gene Symbol: Atxn1
Alias: 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1
Full Name: ataxin 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 463473 bases
Position: chr13:47365770-47829242
Accession: 104783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0036616	AXH	PF08517.12	2.1e-44	1	1
MGP_NODShiLtJ_P0036617	AXH	PF08517.12	2.1e-44	1	1
MGP_NODShiLtJ_P0036615	AXH	PF08517.12	1.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0036617	-	10460	-	MGP_NODShiLtJ_P0036617	791 (aa)	-	-
MGP_NODShiLtJ_T0036616	-	10585	-	MGP_NODShiLtJ_P0036616	791 (aa)	-	-
MGP_NODShiLtJ_T0036615	-	10609	XM_011244380	MGP_NODShiLtJ_P0036615	799 (aa)	XP_011242682	P54254

Gene Model

Click here to download MGP_NODShiLtJ_G0020349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0020349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0020349	Atxn1	100	31.667	MGP_NODShiLtJ_G0033916	Atxn1l	100	31.541