EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0020473 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 11716 bases
Position: chr13:61423012-61434727
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0037008	KH_1	PF00013.29	2.1e-43	1	3
MGP_NODShiLtJ_P0037008	KH_1	PF00013.29	2.1e-43	2	3
MGP_NODShiLtJ_P0037008	KH_1	PF00013.29	2.1e-43	3	3
MGP_NODShiLtJ_P0037009	KH_1	PF00013.29	2.4e-43	1	3
MGP_NODShiLtJ_P0037009	KH_1	PF00013.29	2.4e-43	2	3
MGP_NODShiLtJ_P0037009	KH_1	PF00013.29	2.4e-43	3	3
MGP_NODShiLtJ_P0037005	KH_1	PF00013.29	2.7e-43	1	3
MGP_NODShiLtJ_P0037005	KH_1	PF00013.29	2.7e-43	2	3
MGP_NODShiLtJ_P0037005	KH_1	PF00013.29	2.7e-43	3	3
MGP_NODShiLtJ_P0037006	KH_1	PF00013.29	2.7e-43	1	3
MGP_NODShiLtJ_P0037006	KH_1	PF00013.29	2.7e-43	2	3
MGP_NODShiLtJ_P0037006	KH_1	PF00013.29	2.7e-43	3	3
MGP_NODShiLtJ_P0037007	KH_1	PF00013.29	2.1e-33	1	2
MGP_NODShiLtJ_P0037007	KH_1	PF00013.29	2.1e-33	2	2
MGP_NODShiLtJ_P0037013	KH_1	PF00013.29	1.1e-23	1	2
MGP_NODShiLtJ_P0037013	KH_1	PF00013.29	1.1e-23	2	2
MGP_NODShiLtJ_P0037010	KH_1	PF00013.29	1.6e-23	1	2
MGP_NODShiLtJ_P0037010	KH_1	PF00013.29	1.6e-23	2	2
MGP_NODShiLtJ_P0037016	KH_1	PF00013.29	2.9e-23	1	2
MGP_NODShiLtJ_P0037016	KH_1	PF00013.29	2.9e-23	2	2
MGP_NODShiLtJ_P0037018	KH_1	PF00013.29	3.2e-09	1	1
MGP_NODShiLtJ_P0037020	KH_1	PF00013.29	6.5e-09	1	1
MGP_NODShiLtJ_P0037015	KH_1	PF00013.29	3.4e-05	1	1
MGP_NODShiLtJ_P0037020	KH_2	PF07650.17	0.00011	1	1
MGP_NODShiLtJ_P0037015	KH_2	PF07650.17	0.00023	1	1
MGP_NODShiLtJ_P0037015	ROKNT	PF08067.11	2e-27	1	1
MGP_NODShiLtJ_P0037010	ROKNT	PF08067.11	3e-27	1	1
MGP_NODShiLtJ_P0037020	ROKNT	PF08067.11	3.6e-27	1	1
MGP_NODShiLtJ_P0037008	ROKNT	PF08067.11	7.4e-27	1	1
MGP_NODShiLtJ_P0037009	ROKNT	PF08067.11	7.7e-27	1	1
MGP_NODShiLtJ_P0037013	ROKNT	PF08067.11	1.9e-26	1	1
MGP_NODShiLtJ_P0037005	ROKNT	PF08067.11	3.9e-26	1	1
MGP_NODShiLtJ_P0037006	ROKNT	PF08067.11	3.9e-26	1	1
MGP_NODShiLtJ_P0037016	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0037016	-	676	-	MGP_NODShiLtJ_P0037016	178 (aa)	-	-
MGP_NODShiLtJ_T0037020	-	1053	-	MGP_NODShiLtJ_P0037020	97 (aa)	-	-
MGP_NODShiLtJ_T0037014	-	459	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0037015	-	723	-	MGP_NODShiLtJ_P0037015	77 (aa)	-	-
MGP_NODShiLtJ_T0037012	-	737	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0037013	-	900	-	MGP_NODShiLtJ_P0037013	256 (aa)	-	-
MGP_NODShiLtJ_T0037010	-	1004	-	MGP_NODShiLtJ_P0037010	299 (aa)	-	-
MGP_NODShiLtJ_T0037011	-	522	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0037005	-	2554	XM_006517103	MGP_NODShiLtJ_P0037005	453 (aa)	XP_006517166	P61979
MGP_NODShiLtJ_T0037017	-	833	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0037007	-	2229	-	MGP_NODShiLtJ_P0037007	384 (aa)	-	-
MGP_NODShiLtJ_T0037006	-	2320	-	MGP_NODShiLtJ_P0037006	453 (aa)	-	-
MGP_NODShiLtJ_T0037009	-	2380	-	MGP_NODShiLtJ_P0037009	440 (aa)	-	-
MGP_NODShiLtJ_T0037008	-	2210	-	MGP_NODShiLtJ_P0037008	429 (aa)	-	-
MGP_NODShiLtJ_T0037018	-	476	-	MGP_NODShiLtJ_P0037018	87 (aa)	-	-
MGP_NODShiLtJ_T0037019	-	775	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0020473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0020473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0020473	Hnrnpk	78	32.414	MGP_NODShiLtJ_G0035031	Pcbp4	86	33.728
MGP_NODShiLtJ_G0020473	Hnrnpk	66	44.000	MGP_NODShiLtJ_G0022246	Pcbp2	84	44.444
MGP_NODShiLtJ_G0020473	Hnrnpk	58	39.062	MGP_NODShiLtJ_G0019570	Nova1	56	39.062
MGP_NODShiLtJ_G0020473	Hnrnpk	57	38.462	MGP_NODShiLtJ_G0031556	-	52	37.681
MGP_NODShiLtJ_G0020473	Hnrnpk	57	38.462	MGP_NODShiLtJ_G0031557	Nova2	54	37.681
MGP_NODShiLtJ_G0020473	Hnrnpk	55	36.923	MGP_NODShiLtJ_G0027804	Fubp1	53	36.923
MGP_NODShiLtJ_G0020473	Hnrnpk	78	31.724	MGP_NODShiLtJ_G0030783	Pcbp1	85	42.857
MGP_NODShiLtJ_G0020473	Hnrnpk	93	98.745	MGP_NODShiLtJ_G0032267	-	98	98.745
MGP_NODShiLtJ_G0020473	Hnrnpk	77	50.649	MGP_NODShiLtJ_G0017249	Pcbp3	79	41.667