EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0020485 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc6
Alias: 6030448M23Rik|AA420405
Full Name: zinc finger%2C CCHC domain containing 6
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 51977 bases
Position: chr13:62899433-62951409
Accession: 2387179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0037075	zf-CCHC	PF00098.23	1.1e-13	1	3
MGP_NODShiLtJ_P0037075	zf-CCHC	PF00098.23	1.1e-13	2	3
MGP_NODShiLtJ_P0037075	zf-CCHC	PF00098.23	1.1e-13	3	3
MGP_NODShiLtJ_P0037075	PAP_assoc	PF03828.19	1.5e-27	1	2
MGP_NODShiLtJ_P0037075	PAP_assoc	PF03828.19	1.5e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0037075	-	5551	XM_006517207	MGP_NODShiLtJ_P0037075	1474 (aa)	XP_006517270	E9PUA2
MGP_NODShiLtJ_T0037076	-	5080	-	MGP_NODShiLtJ_P0037076	1491 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0020485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0020485	Zcchc6	58	52.899	MGP_NODShiLtJ_G0028362	Zcchc11	62	52.143