EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0020708 (Gene tree)
Gene ID: -
Gene Symbol: Tnpo1
Alias: AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN
Full Name: transportin 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 95158 bases
Position: chr13:108048541-108143698
Accession: 2681523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0037677	IBN_N	PF03810.19	8.2e-17	1	1
MGP_NODShiLtJ_P0037676	IBN_N	PF03810.19	8.1e-16	1	1
MGP_NODShiLtJ_P0037674	IBN_N	PF03810.19	1e-15	1	1
MGP_NODShiLtJ_P0037675	IBN_N	PF03810.19	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0037676	-	2503	-	MGP_NODShiLtJ_P0037676	807 (aa)	-	-
MGP_NODShiLtJ_T0037677	-	614	-	MGP_NODShiLtJ_P0037677	178 (aa)	-	-
MGP_NODShiLtJ_T0037674	-	8377	XM_006517636	MGP_NODShiLtJ_P0037674	898 (aa)	XP_006517699	Q8BFY9
MGP_NODShiLtJ_T0037675	-	3376	-	MGP_NODShiLtJ_P0037675	916 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0020708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0020708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0020708	Tnpo1	99	85.821	MGP_NODShiLtJ_G0033694	Tnpo2	99	85.569