EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0021166 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
PAB2|Pab2|Pabp2|Pabp3|mPABII|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Plus strand
Length
7971 bases
Position
chr14:52287166-52295136
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0039185RRM_1PF00076.223.8e-1511
MGP_NODShiLtJ_P0039190RRM_1PF00076.224.8e-1511
MGP_NODShiLtJ_P0039189RRM_1PF00076.221.3e-1411
MGP_NODShiLtJ_P0039186RRM_1PF00076.221.4e-1411
MGP_NODShiLtJ_P0039187RRM_1PF00076.221.5e-1411
MGP_NODShiLtJ_P0039191RRM_1PF00076.228.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0039188-826-MGP_NODShiLtJ_P003918873 (aa)--
MGP_NODShiLtJ_T0039189-2528-MGP_NODShiLtJ_P0039189292 (aa)--
MGP_NODShiLtJ_T0039186-1031-MGP_NODShiLtJ_P0039186302 (aa)--
MGP_NODShiLtJ_T0039187-1777-MGP_NODShiLtJ_P0039187319 (aa)--
MGP_NODShiLtJ_T0039185-680XM_006519272MGP_NODShiLtJ_P0039185164 (aa)XP_006519335Q8CCS6
MGP_NODShiLtJ_T0039191-939-MGP_NODShiLtJ_P003919142 (aa)--
MGP_NODShiLtJ_T0039190-700-MGP_NODShiLtJ_P0039190178 (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0021166's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0021166's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0021166Pabpn19361.538MGP_NODShiLtJ_G0034039Pabpn1l5154.422
MGP_NODShiLtJ_G0021166Pabpn1100100.000MGP_NODShiLtJ_G0021165Gm2052157100.000

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