EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0021919 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Plus strand
Length
25199 bases
Position
chr15:91031359-91056557
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0041465APOBEC_NPF08210.112.6e-7912
MGP_NODShiLtJ_P0041465APOBEC_NPF08210.112.6e-7922
MGP_NODShiLtJ_P0041462APOBEC_NPF08210.113.3e-7912
MGP_NODShiLtJ_P0041462APOBEC_NPF08210.113.3e-7922
MGP_NODShiLtJ_P0041466APOBEC_NPF08210.113.3e-7912
MGP_NODShiLtJ_P0041466APOBEC_NPF08210.113.3e-7922
MGP_NODShiLtJ_P0041468APOBEC_NPF08210.113.6e-7912
MGP_NODShiLtJ_P0041468APOBEC_NPF08210.113.6e-7922
MGP_NODShiLtJ_P0041460APOBEC_NPF08210.112.6e-2611
MGP_NODShiLtJ_P0041459APOBEC_NPF08210.117.6e-2611
MGP_NODShiLtJ_P0041469APOBEC_NPF08210.118.7e-2411
MGP_NODShiLtJ_P0041465APOBEC_CPF05240.147.7e-5412
MGP_NODShiLtJ_P0041465APOBEC_CPF05240.147.7e-5422
MGP_NODShiLtJ_P0041462APOBEC_CPF05240.141.2e-5312
MGP_NODShiLtJ_P0041462APOBEC_CPF05240.141.2e-5322
MGP_NODShiLtJ_P0041466APOBEC_CPF05240.141.3e-5312
MGP_NODShiLtJ_P0041466APOBEC_CPF05240.141.3e-5322
MGP_NODShiLtJ_P0041468APOBEC_CPF05240.141.5e-5312
MGP_NODShiLtJ_P0041468APOBEC_CPF05240.141.5e-5322
MGP_NODShiLtJ_P0041459APOBEC_CPF05240.144.4e-2811
MGP_NODShiLtJ_P0041460APOBEC_CPF05240.145.2e-2811
MGP_NODShiLtJ_P0041469APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0041466-2780-MGP_NODShiLtJ_P0041466430 (aa)--
MGP_NODShiLtJ_T0041467-2246-MGP_NODShiLtJ_P0041467392 (aa)--
MGP_NODShiLtJ_T0041464-1217-MGP_NODShiLtJ_P004146446 (aa)--
MGP_NODShiLtJ_T0041465-1980-MGP_NODShiLtJ_P0041465407 (aa)--
MGP_NODShiLtJ_T0041462-2460-MGP_NODShiLtJ_P0041462429 (aa)--
MGP_NODShiLtJ_T0041463-699-MGP_NODShiLtJ_P004146379 (aa)--
MGP_NODShiLtJ_T0041460-817-MGP_NODShiLtJ_P0041460151 (aa)--
MGP_NODShiLtJ_T0041461-607--- (aa)--
MGP_NODShiLtJ_T0041459-750XM_006521551MGP_NODShiLtJ_P0041459166 (aa)XP_006521614Q99J72
MGP_NODShiLtJ_T0041472-720--- (aa)--
MGP_NODShiLtJ_T0041468-1323-MGP_NODShiLtJ_P0041468440 (aa)--
MGP_NODShiLtJ_T0041469-648-MGP_NODShiLtJ_P004146985 (aa)--
MGP_NODShiLtJ_T0041471-2082--- (aa)--
MGP_NODShiLtJ_T0041470-731--- (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0021919's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0021919's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0021919Apobec38438.028MGP_NODShiLtJ_G0031033Apobec17434.737
MGP_NODShiLtJ_G0021919Apobec39642.169MGP_NODShiLtJ_G0031032Aicda9139.344
MGP_NODShiLtJ_G0021919Apobec39833.721MGP_NODShiLtJ_G0023697Apobec27833.333

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