EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0022294 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|AW108387|Sar|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 75031 bases
Position: chr16:967268-1042298
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0042657	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_NODShiLtJ_P0042658	MMR_HSR1	PF01926.23	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0042658	-	5000	-	MGP_NODShiLtJ_P0042658	910 (aa)	-	-
MGP_NODShiLtJ_T0042659	-	366	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0042660	-	349	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0042657	-	3698	XM_006521687	MGP_NODShiLtJ_P0042657	472 (aa)	XP_006521750	Q7TQ48

Gene Model

Click here to download MGP_NODShiLtJ_G0022294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0022294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0022294	Srl	77	33.973	MGP_NODShiLtJ_G0024585	Ehd1	67	33.973
MGP_NODShiLtJ_G0022294	Srl	84	31.738	MGP_NODShiLtJ_G0026176	Ehd4	71	31.738
MGP_NODShiLtJ_G0022294	Srl	82	33.162	MGP_NODShiLtJ_G0031502	Ehd2	97	47.059
MGP_NODShiLtJ_G0022294	Srl	79	32.440	MGP_NODShiLtJ_G0023842	Ehd3	73	32.506