EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0023077 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: BC068284|Zfp206|Zkscan10|Znf206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 11961 bases
Position: chr17:24060238-24072198
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	1	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	2	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	3	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	4	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	5	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	6	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	7	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	8	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	9	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	10	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	11	12
MGP_NODShiLtJ_P0045468	zf-C2H2	PF00096.26	4.3e-68	12	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	1	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	2	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	3	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	4	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	5	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	6	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	7	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	8	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	9	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	10	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	11	12
MGP_NODShiLtJ_P0045469	zf-C2H2	PF00096.26	5e-67	12	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	1	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	2	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	3	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	4	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	5	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	6	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	7	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	8	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	9	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	10	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	11	12
MGP_NODShiLtJ_P0045470	zf-C2H2	PF00096.26	4.7e-66	12	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	1	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	2	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	3	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	4	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	5	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	6	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	7	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	8	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	9	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	10	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	11	12
MGP_NODShiLtJ_P0045471	zf-C2H2	PF00096.26	1.9e-64	12	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	1	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	2	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	3	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	4	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	5	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	6	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	7	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	8	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	9	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	10	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	11	12
MGP_NODShiLtJ_P0045467	zf-C2H2	PF00096.26	5.2e-64	12	12
MGP_NODShiLtJ_P0045472	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_NODShiLtJ_P0045472	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_NODShiLtJ_P0045470	zf-met	PF12874.7	3.7e-07	1	1
MGP_NODShiLtJ_P0045471	zf-met	PF12874.7	1.1e-05	1	1
MGP_NODShiLtJ_P0045467	zf-met	PF12874.7	2.2e-05	1	1
MGP_NODShiLtJ_P0045468	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0045478	-	545	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0045468	-	2365	-	MGP_NODShiLtJ_P0045468	671 (aa)	-	-
MGP_NODShiLtJ_T0045469	-	2695	-	MGP_NODShiLtJ_P0045469	781 (aa)	-	-
MGP_NODShiLtJ_T0045471	-	2268	-	MGP_NODShiLtJ_P0045471	701 (aa)	-	-
MGP_NODShiLtJ_T0045470	-	1899	-	MGP_NODShiLtJ_P0045470	542 (aa)	-	-
MGP_NODShiLtJ_T0045473	-	531	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0045472	-	1071	-	MGP_NODShiLtJ_P0045472	328 (aa)	-	-
MGP_NODShiLtJ_T0045475	-	906	-	MGP_NODShiLtJ_P0045475	190 (aa)	-	-
MGP_NODShiLtJ_T0045467	-	2606	XM_011246504	MGP_NODShiLtJ_P0045467	749 (aa)	XP_011244806	Q3URR7
MGP_NODShiLtJ_T0045477	-	841	-	MGP_NODShiLtJ_P0045477	261 (aa)	-	-
MGP_NODShiLtJ_T0045474	-	888	-	MGP_NODShiLtJ_P0045474	149 (aa)	-	-
MGP_NODShiLtJ_T0045476	-	1003	-	MGP_NODShiLtJ_P0045476	190 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0023077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0023077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0023077	Zscan10	75	50.862	MGP_NODShiLtJ_G0030984	Zfp637	82	45.455
MGP_NODShiLtJ_G0023077	Zscan10	76	43.165	MGP_NODShiLtJ_G0028853	Zbtb17	72	34.627
MGP_NODShiLtJ_G0023077	Zscan10	80	36.597	MGP_NODShiLtJ_G0020555	Zfp748	93	36.552
MGP_NODShiLtJ_G0023077	Zscan10	98	43.564	MGP_NODShiLtJ_G0020128	Zkscan4	95	49.664
MGP_NODShiLtJ_G0023077	Zscan10	76	37.631	MGP_NODShiLtJ_G0018202	Zfp672	100	42.857
MGP_NODShiLtJ_G0023077	Zscan10	79	36.458	MGP_NODShiLtJ_G0030504	Repin1	92	36.705
MGP_NODShiLtJ_G0023077	Zscan10	76	32.797	MGP_NODShiLtJ_G0016424	Zbtb41	54	32.797
MGP_NODShiLtJ_G0023077	Zscan10	85	42.771	MGP_NODShiLtJ_G0029645	Gfi1	51	42.771
MGP_NODShiLtJ_G0023077	Zscan10	78	40.930	MGP_NODShiLtJ_G0031804	Zfp420	99	40.991
MGP_NODShiLtJ_G0023077	Zscan10	80	46.053	MGP_NODShiLtJ_G0033947	Zfp1	79	46.460
MGP_NODShiLtJ_G0023077	Zscan10	79	43.254	MGP_NODShiLtJ_G0032844	E430018J23Rik	64	43.254
MGP_NODShiLtJ_G0023077	Zscan10	76	34.845	MGP_NODShiLtJ_G0033575	Zfp882	85	35.561
MGP_NODShiLtJ_G0023077	Zscan10	99	37.778	MGP_NODShiLtJ_G0024432	Zfp236	74	37.143
MGP_NODShiLtJ_G0023077	Zscan10	80	39.617	MGP_NODShiLtJ_G0031634	Zfp108	58	42.194
MGP_NODShiLtJ_G0023077	Zscan10	78	47.393	MGP_NODShiLtJ_G0031636	Zfp61	51	47.393
MGP_NODShiLtJ_G0023077	Zscan10	77	40.456	MGP_NODShiLtJ_G0031637	Zfp94	70	44.402
MGP_NODShiLtJ_G0023077	Zscan10	88	39.563	MGP_NODShiLtJ_G0031630	Zfp235	71	39.563
MGP_NODShiLtJ_G0023077	Zscan10	75	47.667	MGP_NODShiLtJ_G0021849	Zfp251	67	47.525
MGP_NODShiLtJ_G0023077	Zscan10	86	31.579	MGP_NODShiLtJ_G0031388	-	73	30.796
MGP_NODShiLtJ_G0023077	Zscan10	98	45.525	MGP_NODShiLtJ_G0020539	Rslcan18	84	45.525
MGP_NODShiLtJ_G0023077	Zscan10	75	35.128	MGP_NODShiLtJ_G0033787	Zfp319	93	33.784
MGP_NODShiLtJ_G0023077	Zscan10	86	32.915	MGP_NODShiLtJ_G0031667	Zfp574	93	33.902
MGP_NODShiLtJ_G0023077	Zscan10	83	41.339	MGP_NODShiLtJ_G0026710	Zfp334	69	39.731
MGP_NODShiLtJ_G0023077	Zscan10	76	37.107	MGP_NODShiLtJ_G0026748	Zfp64	77	43.750
MGP_NODShiLtJ_G0023077	Zscan10	80	40.000	MGP_NODShiLtJ_G0031629	Zfp112	56	41.250
MGP_NODShiLtJ_G0023077	Zscan10	78	40.394	MGP_NODShiLtJ_G0032842	9130019O22Rik	68	40.394
MGP_NODShiLtJ_G0023077	Zscan10	79	43.254	MGP_NODShiLtJ_G0032843	-	64	43.254
MGP_NODShiLtJ_G0023077	Zscan10	79	45.914	MGP_NODShiLtJ_G0032840	Zfp768	51	44.944
MGP_NODShiLtJ_G0023077	Zscan10	78	36.820	MGP_NODShiLtJ_G0031938	Zfp715	64	36.820
MGP_NODShiLtJ_G0023077	Zscan10	81	39.564	MGP_NODShiLtJ_G0023050	Zfp51	88	38.060
MGP_NODShiLtJ_G0023077	Zscan10	78	39.117	MGP_NODShiLtJ_G0034217	Zfp26	72	40.342
MGP_NODShiLtJ_G0023077	Zscan10	76	46.199	MGP_NODShiLtJ_G0031379	Zfp628	63	46.199
MGP_NODShiLtJ_G0023077	Zscan10	87	32.765	MGP_NODShiLtJ_G0020540	Zfp759	92	35.036
MGP_NODShiLtJ_G0023077	Zscan10	86	31.579	MGP_NODShiLtJ_G0031387	Zfp865	82	31.579
MGP_NODShiLtJ_G0023077	Zscan10	83	37.160	MGP_NODShiLtJ_G0018250	Zfp867	83	37.160
MGP_NODShiLtJ_G0023077	Zscan10	75	44.554	MGP_NODShiLtJ_G0018107	Zfp454	70	41.854
MGP_NODShiLtJ_G0023077	Zscan10	81	41.509	MGP_NODShiLtJ_G0026280	Zfp661	63	44.082
MGP_NODShiLtJ_G0023077	Zscan10	79	37.696	MGP_NODShiLtJ_G0018837	Zfp652	61	37.696
MGP_NODShiLtJ_G0023077	Zscan10	82	35.235	MGP_NODShiLtJ_G0030639	Prdm5	79	46.377
MGP_NODShiLtJ_G0023077	Zscan10	79	36.891	MGP_NODShiLtJ_G0023048	Zfp677	90	36.891
MGP_NODShiLtJ_G0023077	Zscan10	77	47.701	MGP_NODShiLtJ_G0029310	Zbtb49	62	50.704
MGP_NODShiLtJ_G0023077	Zscan10	78	37.313	MGP_NODShiLtJ_G0023070	Zfp945	80	37.313