EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0023711 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 27058 bases
Position: chr17:58711757-58738814
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0047886	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0047886	-	1639	-	MGP_NODShiLtJ_P0047886	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_NODShiLtJ_G0023711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0023711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0023711	Rab5a	82	31.667	MGP_NODShiLtJ_G0033021	Hras	94	31.667
MGP_NODShiLtJ_G0023711	Rab5a	77	40.351	MGP_NODShiLtJ_G0027010	Rab33b	75	40.351
MGP_NODShiLtJ_G0023711	Rab5a	73	33.121	MGP_NODShiLtJ_G0029158	Rheb	85	33.121
MGP_NODShiLtJ_G0023711	Rab5a	74	40.881	MGP_NODShiLtJ_G0019721	Rab15	75	40.881
MGP_NODShiLtJ_G0023711	Rab5a	78	41.916	MGP_NODShiLtJ_G0021129	Rab2b	79	44.079
MGP_NODShiLtJ_G0023711	Rab5a	56	33.065	MGP_NODShiLtJ_G0030909	Arl8b	63	33.065
MGP_NODShiLtJ_G0023711	Rab5a	81	37.989	MGP_NODShiLtJ_G0023809	Rab12	62	37.989
MGP_NODShiLtJ_G0023711	Rab5a	91	41.951	MGP_NODShiLtJ_G0034740	Rab11a	88	48.148
MGP_NODShiLtJ_G0023711	Rab5a	80	31.667	MGP_NODShiLtJ_G0031291	Kras	94	31.667
MGP_NODShiLtJ_G0023711	Rab5a	90	46.429	MGP_NODShiLtJ_G0024523	Rab1b	96	46.429
MGP_NODShiLtJ_G0023711	Rab5a	90	49.231	MGP_NODShiLtJ_G0026777	Rab22a	98	49.231
MGP_NODShiLtJ_G0023711	Rab5a	90	40.704	MGP_NODShiLtJ_G0027215	Rab25	93	40.704
MGP_NODShiLtJ_G0023711	Rab5a	75	41.566	MGP_NODShiLtJ_G0035482	Rab33a	70	41.566
MGP_NODShiLtJ_G0023711	Rab5a	95	41.951	MGP_NODShiLtJ_G0019228	Rab37	93	41.951
MGP_NODShiLtJ_G0023711	Rab5a	74	38.125	MGP_NODShiLtJ_G0015768	Rab23	67	38.125
MGP_NODShiLtJ_G0023711	Rab5a	81	43.678	MGP_NODShiLtJ_G0032323	Rab30	86	43.678
MGP_NODShiLtJ_G0023711	Rab5a	90	41.667	MGP_NODShiLtJ_G0023355	Rab11b	94	41.667
MGP_NODShiLtJ_G0023711	Rab5a	55	30.159	MGP_NODShiLtJ_G0019557	Arl4a	60	30.159
MGP_NODShiLtJ_G0023711	Rab5a	100	87.500	MGP_NODShiLtJ_G0019020	Rab5c	100	87.500
MGP_NODShiLtJ_G0023711	Rab5a	81	40.782	MGP_NODShiLtJ_G0030810	Rab7	99	47.436
MGP_NODShiLtJ_G0023711	Rab5a	78	31.737	MGP_NODShiLtJ_G0031397	Rasl2-9	76	31.737
MGP_NODShiLtJ_G0023711	Rab5a	60	32.576	MGP_NODShiLtJ_G0016389	Arl8a	66	32.576
MGP_NODShiLtJ_G0023711	Rab5a	76	32.727	MGP_NODShiLtJ_G0027505	Nras	99	34.667
MGP_NODShiLtJ_G0023711	Rab5a	75	36.585	MGP_NODShiLtJ_G0035647	Rab39b	77	36.585
MGP_NODShiLtJ_G0023711	Rab5a	74	35.928	MGP_NODShiLtJ_G0022069	Rabl2	72	35.928
MGP_NODShiLtJ_G0023711	Rab5a	95	41.546	MGP_NODShiLtJ_G0032382	Rab6a	98	41.546
MGP_NODShiLtJ_G0023711	Rab5a	90	34.328	MGP_NODShiLtJ_G0036041	Rab9	97	34.328
MGP_NODShiLtJ_G0023711	Rab5a	91	30.244	MGP_NODShiLtJ_G0017209	Rab36	77	30.244
MGP_NODShiLtJ_G0023711	Rab5a	75	41.615	MGP_NODShiLtJ_G0027854	Rab2a	97	36.667
MGP_NODShiLtJ_G0023711	Rab5a	73	32.500	MGP_NODShiLtJ_G0018616	Rab34	62	32.500
MGP_NODShiLtJ_G0023711	Rab5a	100	81.860	MGP_NODShiLtJ_G0017738	Rab5b	100	81.860
MGP_NODShiLtJ_G0023711	Rab5a	90	43.814	MGP_NODShiLtJ_G0017921	Rab1a	95	43.814
MGP_NODShiLtJ_G0023711	Rab5a	89	38.614	MGP_NODShiLtJ_G0025488	Rab14	94	38.614
MGP_NODShiLtJ_G0023711	Rab5a	91	47.449	MGP_NODShiLtJ_G0023800	Rab31	98	47.449
MGP_NODShiLtJ_G0023711	Rab5a	95	42.718	MGP_NODShiLtJ_G0034993	Rab6b	98	42.718
MGP_NODShiLtJ_G0023711	Rab5a	90	35.323	MGP_NODShiLtJ_G0035888	Rab9b	97	35.323