EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0023770 (Gene tree)
Gene ID: -
Gene Symbol: Khsrp
Alias: 6330409F21Rik|Fbp2|Fubp2|KSRP|Ksrp
Full Name: KH-type splicing regulatory protein
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 15166 bases
Position: chr17:62876323-62891488
Accession: 1336214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0048020	KH_1	PF00013.29	3e-65	1	4
MGP_NODShiLtJ_P0048020	KH_1	PF00013.29	3e-65	2	4
MGP_NODShiLtJ_P0048020	KH_1	PF00013.29	3e-65	3	4
MGP_NODShiLtJ_P0048020	KH_1	PF00013.29	3e-65	4	4
MGP_NODShiLtJ_P0048020	KH_2	PF07650.17	1.2e-18	1	1
MGP_NODShiLtJ_P0048020	DUF1897	PF09005.10	2.1e-13	1	2
MGP_NODShiLtJ_P0048020	DUF1897	PF09005.10	2.1e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0048020	-	4006	-	MGP_NODShiLtJ_P0048020	748 (aa)	-	Q3U0V1

Gene Model

Click here to download MGP_NODShiLtJ_G0023770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0023770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0023770	Khsrp	54	34.091	MGP_NODShiLtJ_G0035031	Pcbp4	76	32.323
MGP_NODShiLtJ_G0023770	Khsrp	70	67.654	MGP_NODShiLtJ_G0027804	Fubp1	96	64.410
MGP_NODShiLtJ_G0023770	Khsrp	84	48.682	MGP_NODShiLtJ_G0025424	Fubp3	95	58.824
MGP_NODShiLtJ_G0023770	Khsrp	54	34.667	MGP_NODShiLtJ_G0030783	Pcbp1	69	34.667
MGP_NODShiLtJ_G0023770	Khsrp	51	33.333	MGP_NODShiLtJ_G0022246	Pcbp2	68	33.333