EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0023950 (Gene tree)
Gene ID: -
Gene Symbol: Zeb1
Alias: 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1
Full Name: zinc finger E-box binding homeobox 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 204216 bases
Position: chr18:2631843-2836058
Accession: 1344313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0048590	zf-C2H2	PF00096.26	2.7e-17	1	4
MGP_NODShiLtJ_P0048590	zf-C2H2	PF00096.26	2.7e-17	2	4
MGP_NODShiLtJ_P0048590	zf-C2H2	PF00096.26	2.7e-17	3	4
MGP_NODShiLtJ_P0048590	zf-C2H2	PF00096.26	2.7e-17	4	4
MGP_NODShiLtJ_P0048590	zf-met	PF12874.7	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0048598	-	2459	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0048591	-	1938	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0048590	-	5649	XM_006525770	MGP_NODShiLtJ_P0048590	1065 (aa)	XP_006525832	Q64318
MGP_NODShiLtJ_T0048593	-	1012	-	MGP_NODShiLtJ_P0048593	19 (aa)	-	-
MGP_NODShiLtJ_T0048592	-	1282	-	MGP_NODShiLtJ_P0048592	105 (aa)	-	-
MGP_NODShiLtJ_T0048595	-	681	-	MGP_NODShiLtJ_P0048595	123 (aa)	-	-
MGP_NODShiLtJ_T0048594	-	790	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0048597	-	1610	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0048596	-	2261	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0023950	Zeb1	88	59.375	MGP_NODShiLtJ_G0025554	Zeb2	95	46.739