EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0024232 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 67129 bases
Position: chr18:47689075-47756203
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0049293	R3H	PF01424.22	1.4e-10	1	1
MGP_NODShiLtJ_P0049293	DEAD	PF00270.29	2.7e-09	1	1
MGP_NODShiLtJ_P0049293	YTH	PF04146.15	1.6e-42	1	1
MGP_NODShiLtJ_P0049293	HA2	PF04408.23	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0049293	-	7019	-	MGP_NODShiLtJ_P0049293	1477 (aa)	-	B2RR83
MGP_NODShiLtJ_T0049295	-	4006	-	MGP_NODShiLtJ_P0049295	585 (aa)	-	-
MGP_NODShiLtJ_T0049294	-	1331	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0049296	-	444	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0024232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0024232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0024232	Ythdc2	70	35.392	MGP_NODShiLtJ_G0035138	Dhx30	56	47.236
MGP_NODShiLtJ_G0024232	Ythdc2	69	31.785	MGP_NODShiLtJ_G0029346	Dhx15	80	41.262
MGP_NODShiLtJ_G0024232	Ythdc2	90	35.912	MGP_NODShiLtJ_G0016468	Dhx9	56	47.685
MGP_NODShiLtJ_G0024232	Ythdc2	88	36.015	MGP_NODShiLtJ_G0027070	Dhx36	74	48.341
MGP_NODShiLtJ_G0024232	Ythdc2	72	36.504	MGP_NODShiLtJ_G0023880	Dhx57	59	43.544
MGP_NODShiLtJ_G0024232	Ythdc2	89	32.714	MGP_NODShiLtJ_G0020778	Dhx29	53	48.804