EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0024432 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 107951 bases
Position: chr18:90097062-90205012
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	1	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	2	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	3	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	4	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	5	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	6	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	7	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	8	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	9	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	10	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	11	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	12	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	13	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	14	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	15	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	16	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	17	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	18	19
MGP_NODShiLtJ_P0049906	zf-C2H2	PF00096.26	8.9e-111	19	19
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_NODShiLtJ_P0049903	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_NODShiLtJ_P0049909	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_NODShiLtJ_P0049903	zf-met	PF12874.7	5.9e-06	1	4
MGP_NODShiLtJ_P0049903	zf-met	PF12874.7	5.9e-06	2	4
MGP_NODShiLtJ_P0049903	zf-met	PF12874.7	5.9e-06	3	4
MGP_NODShiLtJ_P0049903	zf-met	PF12874.7	5.9e-06	4	4
MGP_NODShiLtJ_P0049906	zf-met	PF12874.7	2.8e-05	1	4
MGP_NODShiLtJ_P0049906	zf-met	PF12874.7	2.8e-05	2	4
MGP_NODShiLtJ_P0049906	zf-met	PF12874.7	2.8e-05	3	4
MGP_NODShiLtJ_P0049906	zf-met	PF12874.7	2.8e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0049909	-	410	-	MGP_NODShiLtJ_P0049909	65 (aa)	-	-
MGP_NODShiLtJ_T0049908	-	665	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0049903	-	9512	XM_006526490	MGP_NODShiLtJ_P0049903	1799 (aa)	XP_006526553	B2RR24
MGP_NODShiLtJ_T0049905	-	3227	-	MGP_NODShiLtJ_P0049905	42 (aa)	-	-
MGP_NODShiLtJ_T0049904	-	9576	-	MGP_NODShiLtJ_P0049904	1845 (aa)	-	-
MGP_NODShiLtJ_T0049907	-	6131	-	MGP_NODShiLtJ_P0049907	472 (aa)	-	-
MGP_NODShiLtJ_T0049906	-	6020	-	MGP_NODShiLtJ_P0049906	1834 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0024432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0024432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0024432	Zfp236	66	48.864	MGP_NODShiLtJ_G0026936	Mynn	60	43.636
MGP_NODShiLtJ_G0024432	Zfp236	69	44.643	MGP_NODShiLtJ_G0031387	Zfp865	78	44.643
MGP_NODShiLtJ_G0024432	Zfp236	69	40.559	MGP_NODShiLtJ_G0021849	Zfp251	79	45.536
MGP_NODShiLtJ_G0024432	Zfp236	61	41.964	MGP_NODShiLtJ_G0028853	Zbtb17	61	42.727
MGP_NODShiLtJ_G0024432	Zfp236	70	46.296	MGP_NODShiLtJ_G0034217	Zfp26	70	47.273
MGP_NODShiLtJ_G0024432	Zfp236	77	40.157	MGP_NODShiLtJ_G0018250	Zfp867	94	45.902
MGP_NODShiLtJ_G0024432	Zfp236	74	37.143	MGP_NODShiLtJ_G0023077	Zscan10	99	37.778
MGP_NODShiLtJ_G0024432	Zfp236	80	38.732	MGP_NODShiLtJ_G0023070	Zfp945	79	40.000
MGP_NODShiLtJ_G0024432	Zfp236	59	36.242	MGP_NODShiLtJ_G0034030	Snai3	68	47.297
MGP_NODShiLtJ_G0024432	Zfp236	58	42.177	MGP_NODShiLtJ_G0032844	E430018J23Rik	58	42.177
MGP_NODShiLtJ_G0024432	Zfp236	67	47.297	MGP_NODShiLtJ_G0032842	9130019O22Rik	84	47.297
MGP_NODShiLtJ_G0024432	Zfp236	58	42.177	MGP_NODShiLtJ_G0032843	-	58	42.177
MGP_NODShiLtJ_G0024432	Zfp236	58	48.780	MGP_NODShiLtJ_G0032840	Zfp768	53	45.536
MGP_NODShiLtJ_G0024432	Zfp236	55	30.734	MGP_NODShiLtJ_G0031390	Zfp784	79	40.244
MGP_NODShiLtJ_G0024432	Zfp236	79	36.471	MGP_NODShiLtJ_G0018202	Zfp672	91	47.009
MGP_NODShiLtJ_G0024432	Zfp236	66	45.455	MGP_NODShiLtJ_G0030984	Zfp637	85	51.807
MGP_NODShiLtJ_G0024432	Zfp236	62	42.647	MGP_NODShiLtJ_G0031637	Zfp94	76	42.647
MGP_NODShiLtJ_G0024432	Zfp236	62	42.697	MGP_NODShiLtJ_G0018107	Zfp454	75	42.982
MGP_NODShiLtJ_G0024432	Zfp236	63	42.500	MGP_NODShiLtJ_G0031667	Zfp574	95	41.304
MGP_NODShiLtJ_G0024432	Zfp236	81	41.758	MGP_NODShiLtJ_G0030504	Repin1	99	41.667
MGP_NODShiLtJ_G0024432	Zfp236	77	40.690	MGP_NODShiLtJ_G0033787	Zfp319	88	40.690
MGP_NODShiLtJ_G0024432	Zfp236	69	41.121	MGP_NODShiLtJ_G0033575	Zfp882	87	45.652
MGP_NODShiLtJ_G0024432	Zfp236	61	47.674	MGP_NODShiLtJ_G0020128	Zkscan4	52	47.674
MGP_NODShiLtJ_G0024432	Zfp236	59	41.096	MGP_NODShiLtJ_G0031379	Zfp628	61	42.500
MGP_NODShiLtJ_G0024432	Zfp236	74	43.411	MGP_NODShiLtJ_G0031630	Zfp235	66	43.411
MGP_NODShiLtJ_G0024432	Zfp236	65	44.643	MGP_NODShiLtJ_G0031634	Zfp108	58	45.000
MGP_NODShiLtJ_G0024432	Zfp236	62	42.857	MGP_NODShiLtJ_G0031636	Zfp61	57	42.857
MGP_NODShiLtJ_G0024432	Zfp236	61	41.228	MGP_NODShiLtJ_G0026280	Zfp661	69	42.857
MGP_NODShiLtJ_G0024432	Zfp236	73	42.857	MGP_NODShiLtJ_G0031938	Zfp715	69	41.935
MGP_NODShiLtJ_G0024432	Zfp236	76	43.860	MGP_NODShiLtJ_G0030639	Prdm5	86	46.739
MGP_NODShiLtJ_G0024432	Zfp236	79	47.059	MGP_NODShiLtJ_G0031804	Zfp420	99	47.059
MGP_NODShiLtJ_G0024432	Zfp236	64	39.806	MGP_NODShiLtJ_G0031629	Zfp112	52	42.742
MGP_NODShiLtJ_G0024432	Zfp236	69	42.222	MGP_NODShiLtJ_G0023048	Zfp677	74	45.455
MGP_NODShiLtJ_G0024432	Zfp236	61	43.925	MGP_NODShiLtJ_G0029310	Zbtb49	62	47.887
MGP_NODShiLtJ_G0024432	Zfp236	80	37.975	MGP_NODShiLtJ_G0020540	Zfp759	97	37.975
MGP_NODShiLtJ_G0024432	Zfp236	86	31.818	MGP_NODShiLtJ_G0017036	Zbtb24	54	45.794
MGP_NODShiLtJ_G0024432	Zfp236	79	44.545	MGP_NODShiLtJ_G0026710	Zfp334	68	46.667
MGP_NODShiLtJ_G0024432	Zfp236	59	41.748	MGP_NODShiLtJ_G0018837	Zfp652	60	41.748
MGP_NODShiLtJ_G0024432	Zfp236	81	53.333	MGP_NODShiLtJ_G0026747	Sall4	73	53.333
MGP_NODShiLtJ_G0024432	Zfp236	78	41.667	MGP_NODShiLtJ_G0026748	Zfp64	70	44.000
MGP_NODShiLtJ_G0024432	Zfp236	75	45.283	MGP_NODShiLtJ_G0023050	Zfp51	75	45.283
MGP_NODShiLtJ_G0024432	Zfp236	66	38.824	MGP_NODShiLtJ_G0016424	Zbtb41	68	31.481
MGP_NODShiLtJ_G0024432	Zfp236	82	37.324	MGP_NODShiLtJ_G0020555	Zfp748	95	41.905
MGP_NODShiLtJ_G0024432	Zfp236	75	34.940	MGP_NODShiLtJ_G0032867	Zfp646	89	36.458
MGP_NODShiLtJ_G0024432	Zfp236	58	47.727	MGP_NODShiLtJ_G0020539	Rslcan18	70	47.727
MGP_NODShiLtJ_G0024432	Zfp236	60	45.652	MGP_NODShiLtJ_G0033947	Zfp1	67	45.714