EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0024836 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 192929 bases
Position: chr19:26800351-26993279
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0051085	ResIII	PF04851.15	3.9e-08	1	1
MGP_NODShiLtJ_P0051086	ResIII	PF04851.15	4e-08	1	1
MGP_NODShiLtJ_P0051088	ResIII	PF04851.15	2.1e-06	1	1
MGP_NODShiLtJ_P0051088	BRK	PF07533.16	3.6e-17	1	1
MGP_NODShiLtJ_P0051085	BRK	PF07533.16	3.7e-17	1	1
MGP_NODShiLtJ_P0051086	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0051085	-	5865	XM_006527281	MGP_NODShiLtJ_P0051085	1585 (aa)	XP_006527344	A0A140LHE2
MGP_NODShiLtJ_T0051096	-	788	-	MGP_NODShiLtJ_P0051096	224 (aa)	-	-
MGP_NODShiLtJ_T0051087	-	5920	-	MGP_NODShiLtJ_P0051087	1512 (aa)	-	-
MGP_NODShiLtJ_T0051086	-	5869	-	MGP_NODShiLtJ_P0051086	1603 (aa)	-	-
MGP_NODShiLtJ_T0051092	-	867	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0051093	-	426	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0051090	-	661	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0051091	-	1584	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0051094	-	929	-	MGP_NODShiLtJ_P0051094	254 (aa)	-	-
MGP_NODShiLtJ_T0051097	-	879	-	MGP_NODShiLtJ_P0051097	276 (aa)	-	-
MGP_NODShiLtJ_T0051089	-	651	-	MGP_NODShiLtJ_P0051089	175 (aa)	-	-
MGP_NODShiLtJ_T0051088	-	4584	-	MGP_NODShiLtJ_P0051088	1527 (aa)	-	-
MGP_NODShiLtJ_T0051098	-	1859	-	MGP_NODShiLtJ_P0051098	236 (aa)	-	-
MGP_NODShiLtJ_T0051099	-	835	-	MGP_NODShiLtJ_P0051099	235 (aa)	-	-
MGP_NODShiLtJ_T0051095	-	942	-	MGP_NODShiLtJ_P0051095	254 (aa)	-	-
MGP_NODShiLtJ_T0051100	-	490	-	MGP_NODShiLtJ_P0051100	83 (aa)	-	-
MGP_NODShiLtJ_T0051101	-	1461	-	MGP_NODShiLtJ_P0051101	113 (aa)	-	-
MGP_NODShiLtJ_T0051102	-	968	-	MGP_NODShiLtJ_P0051102	119 (aa)	-	-
MGP_NODShiLtJ_T0051103	-	736	-	MGP_NODShiLtJ_P0051103	119 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0024836	Smarca2	96	73.829	MGP_NODShiLtJ_G0034258	Smarca4	92	79.726