EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0025204 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 34609 bases
Position: chr2:13329224-13363832
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0052378	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_NODShiLtJ_P0052380	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0052385	-	706	-	MGP_NODShiLtJ_P0052385	56 (aa)	-	-
MGP_NODShiLtJ_T0052383	-	778	-	MGP_NODShiLtJ_P0052383	30 (aa)	-	-
MGP_NODShiLtJ_T0052382	-	481	-	MGP_NODShiLtJ_P0052382	35 (aa)	-	-
MGP_NODShiLtJ_T0052381	-	1035	-	MGP_NODShiLtJ_P0052381	40 (aa)	-	-
MGP_NODShiLtJ_T0052380	-	6963	-	MGP_NODShiLtJ_P0052380	180 (aa)	-	-
MGP_NODShiLtJ_T0052378	-	6915	XM_017319316	MGP_NODShiLtJ_P0052378	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_NODShiLtJ_T0052384	-	3210	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0025204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0025204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0025204	Arl5b	93	51.572	MGP_NODShiLtJ_G0017494	Arl1	96	50.286
MGP_NODShiLtJ_G0025204	Arl5b	96	44.512	MGP_NODShiLtJ_G0024579	Arl2	90	44.242
MGP_NODShiLtJ_G0025204	Arl5b	99	44.444	MGP_NODShiLtJ_G0030316	Arf5	100	44.444
MGP_NODShiLtJ_G0025204	Arl5b	67	30.952	MGP_NODShiLtJ_G0026777	Rab22a	61	30.952
MGP_NODShiLtJ_G0025204	Arl5b	98	81.437	MGP_NODShiLtJ_G0025570	Arl5a	100	79.888
MGP_NODShiLtJ_G0025204	Arl5b	98	49.718	MGP_NODShiLtJ_G0022137	Arf3	98	49.718
MGP_NODShiLtJ_G0025204	Arl5b	83	30.667	MGP_NODShiLtJ_G0030909	Arl8b	78	30.667
MGP_NODShiLtJ_G0025204	Arl5b	93	40.000	MGP_NODShiLtJ_G0021278	Arl11	91	40.000
MGP_NODShiLtJ_G0025204	Arl5b	94	43.373	MGP_NODShiLtJ_G0019557	Arl4a	85	43.787
MGP_NODShiLtJ_G0025204	Arl5b	96	37.500	MGP_NODShiLtJ_G0027109	Arl14	90	37.500
MGP_NODShiLtJ_G0025204	Arl5b	98	49.718	MGP_NODShiLtJ_G0019124	Arf2	98	49.718
MGP_NODShiLtJ_G0025204	Arl5b	84	33.562	MGP_NODShiLtJ_G0016389	Arl8a	78	33.553
MGP_NODShiLtJ_G0025204	Arl5b	65	34.211	MGP_NODShiLtJ_G0020411	Arl10	55	34.211
MGP_NODShiLtJ_G0025204	Arl5b	97	74.286	MGP_NODShiLtJ_G0018896	Arl5c	98	74.286
MGP_NODShiLtJ_G0025204	Arl5b	92	37.126	MGP_NODShiLtJ_G0026836	Arfrp1	84	40.196
MGP_NODShiLtJ_G0025204	Arl5b	94	39.759	MGP_NODShiLtJ_G0019063	Arl4d	83	39.759
MGP_NODShiLtJ_G0025204	Arl5b	90	42.593	MGP_NODShiLtJ_G0016157	Arl4c	85	42.169
MGP_NODShiLtJ_G0025204	Arl5b	92	39.506	MGP_NODShiLtJ_G0022760	Arl6	89	39.157
MGP_NODShiLtJ_G0025204	Arl5b	99	43.094	MGP_NODShiLtJ_G0025046	Arl3	99	43.094