EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0025424 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 44702 bases
Position: chr2:31730127-31774828
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0053667	KH_1	PF00013.29	1e-68	1	4
MGP_NODShiLtJ_P0053667	KH_1	PF00013.29	1e-68	2	4
MGP_NODShiLtJ_P0053667	KH_1	PF00013.29	1e-68	3	4
MGP_NODShiLtJ_P0053667	KH_1	PF00013.29	1e-68	4	4
MGP_NODShiLtJ_P0053671	KH_1	PF00013.29	1.1e-68	1	4
MGP_NODShiLtJ_P0053671	KH_1	PF00013.29	1.1e-68	2	4
MGP_NODShiLtJ_P0053671	KH_1	PF00013.29	1.1e-68	3	4
MGP_NODShiLtJ_P0053671	KH_1	PF00013.29	1.1e-68	4	4
MGP_NODShiLtJ_P0053674	KH_1	PF00013.29	7.6e-19	1	1
MGP_NODShiLtJ_P0053670	KH_1	PF00013.29	8.1e-11	1	1
MGP_NODShiLtJ_P0053667	KH_2	PF07650.17	7.7e-21	1	1
MGP_NODShiLtJ_P0053671	KH_2	PF07650.17	8e-21	1	1
MGP_NODShiLtJ_P0053674	KH_2	PF07650.17	1.4e-05	1	1
MGP_NODShiLtJ_P0053675	DUF1897	PF09005.10	4.2e-09	1	2
MGP_NODShiLtJ_P0053675	DUF1897	PF09005.10	4.2e-09	2	2
MGP_NODShiLtJ_P0053676	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0053667	-	3138	XM_006498126	MGP_NODShiLtJ_P0053667	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_NODShiLtJ_T0053669	-	1909	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0053668	-	372	-	MGP_NODShiLtJ_P0053668	97 (aa)	-	-
MGP_NODShiLtJ_T0053670	-	425	-	MGP_NODShiLtJ_P0053670	123 (aa)	-	-
MGP_NODShiLtJ_T0053671	-	3516	-	MGP_NODShiLtJ_P0053671	575 (aa)	-	-
MGP_NODShiLtJ_T0053672	-	453	-	MGP_NODShiLtJ_P0053672	83 (aa)	-	-
MGP_NODShiLtJ_T0053673	-	908	-	MGP_NODShiLtJ_P0053673	191 (aa)	-	-
MGP_NODShiLtJ_T0053674	-	1073	-	MGP_NODShiLtJ_P0053674	263 (aa)	-	-
MGP_NODShiLtJ_T0053675	-	711	-	MGP_NODShiLtJ_P0053675	103 (aa)	-	-
MGP_NODShiLtJ_T0053676	-	437	-	MGP_NODShiLtJ_P0053676	52 (aa)	-	-
MGP_NODShiLtJ_T0053677	-	2210	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0025424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0025424	Fubp3	88	32.370	MGP_NODShiLtJ_G0030783	Pcbp1	60	31.169
MGP_NODShiLtJ_G0025424	Fubp3	96	64.324	MGP_NODShiLtJ_G0027804	Fubp1	94	59.208
MGP_NODShiLtJ_G0025424	Fubp3	95	58.824	MGP_NODShiLtJ_G0023770	Khsrp	84	48.682
MGP_NODShiLtJ_G0025424	Fubp3	77	31.973	MGP_NODShiLtJ_G0017249	Pcbp3	85	31.973
MGP_NODShiLtJ_G0025424	Fubp3	58	30.000	MGP_NODShiLtJ_G0022496	Igf2bp2	66	30.000
MGP_NODShiLtJ_G0025424	Fubp3	71	31.707	MGP_NODShiLtJ_G0027367	-	77	31.707
MGP_NODShiLtJ_G0025424	Fubp3	70	36.000	MGP_NODShiLtJ_G0035031	Pcbp4	83	36.000