EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0025554 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 141789 bases
Position: chr2:47515334-47657122
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0054358	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_NODShiLtJ_P0054358	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_NODShiLtJ_P0054358	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_NODShiLtJ_P0054358	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_NODShiLtJ_P0054358	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_NODShiLtJ_P0054360	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NODShiLtJ_P0054360	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NODShiLtJ_P0054360	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NODShiLtJ_P0054360	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NODShiLtJ_P0054360	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NODShiLtJ_P0054355	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NODShiLtJ_P0054355	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NODShiLtJ_P0054355	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NODShiLtJ_P0054355	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NODShiLtJ_P0054355	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NODShiLtJ_P0054357	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NODShiLtJ_P0054357	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NODShiLtJ_P0054357	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NODShiLtJ_P0054357	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NODShiLtJ_P0054357	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NODShiLtJ_P0054359	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NODShiLtJ_P0054359	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NODShiLtJ_P0054359	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NODShiLtJ_P0054359	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NODShiLtJ_P0054359	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NODShiLtJ_P0054356	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_NODShiLtJ_P0054356	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_NODShiLtJ_P0054356	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_NODShiLtJ_P0054356	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_NODShiLtJ_P0054356	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_NODShiLtJ_P0054361	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_NODShiLtJ_P0054361	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_NODShiLtJ_P0054361	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_NODShiLtJ_P0054361	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_NODShiLtJ_P0054358	zf-met	PF12874.7	1.4e-06	1	1
MGP_NODShiLtJ_P0054360	zf-met	PF12874.7	1.7e-06	1	1
MGP_NODShiLtJ_P0054355	zf-met	PF12874.7	1.7e-06	1	1
MGP_NODShiLtJ_P0054357	zf-met	PF12874.7	1.7e-06	1	1
MGP_NODShiLtJ_P0054359	zf-met	PF12874.7	1.7e-06	1	1
MGP_NODShiLtJ_P0054356	zf-met	PF12874.7	2.3e-06	1	1
MGP_NODShiLtJ_P0054361	zf-met	PF12874.7	5.8e-05	1	2
MGP_NODShiLtJ_P0054361	zf-met	PF12874.7	5.8e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0054378	-	370	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054356	-	5165	-	MGP_NODShiLtJ_P0054356	1259 (aa)	-	-
MGP_NODShiLtJ_T0054358	-	4063	-	MGP_NODShiLtJ_P0054358	1191 (aa)	-	-
MGP_NODShiLtJ_T0054359	-	4020	-	MGP_NODShiLtJ_P0054359	1215 (aa)	-	-
MGP_NODShiLtJ_T0054370	-	2916	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054371	-	550	-	MGP_NODShiLtJ_P0054371	91 (aa)	-	-
MGP_NODShiLtJ_T0054372	-	577	-	MGP_NODShiLtJ_P0054372	63 (aa)	-	-
MGP_NODShiLtJ_T0054373	-	462	-	MGP_NODShiLtJ_P0054373	83 (aa)	-	-
MGP_NODShiLtJ_T0054374	-	2068	-	MGP_NODShiLtJ_P0054374	37 (aa)	-	-
MGP_NODShiLtJ_T0054375	-	2608	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054376	-	2690	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054377	-	2989	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054367	-	618	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054366	-	631	-	MGP_NODShiLtJ_P0054366	141 (aa)	-	-
MGP_NODShiLtJ_T0054365	-	453	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054364	-	709	-	MGP_NODShiLtJ_P0054364	184 (aa)	-	-
MGP_NODShiLtJ_T0054363	-	240	-	MGP_NODShiLtJ_P0054363	79 (aa)	-	-
MGP_NODShiLtJ_T0054362	-	868	-	MGP_NODShiLtJ_P0054362	214 (aa)	-	-
MGP_NODShiLtJ_T0054361	-	2236	-	MGP_NODShiLtJ_P0054361	731 (aa)	-	-
MGP_NODShiLtJ_T0054360	-	3913	-	MGP_NODShiLtJ_P0054360	1214 (aa)	-	-
MGP_NODShiLtJ_T0054369	-	2616	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054368	-	443	-	MGP_NODShiLtJ_P0054368	113 (aa)	-	-
MGP_NODShiLtJ_T0054357	-	5454	-	MGP_NODShiLtJ_P0054357	1215 (aa)	-	-
MGP_NODShiLtJ_T0054381	-	432	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054380	-	3806	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054379	-	644	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054355	-	8933	XM_006498042	MGP_NODShiLtJ_P0054355	1215 (aa)	XP_006498105	Q9R0G7

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0025554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0025554	Zeb2	95	46.739	MGP_NODShiLtJ_G0023950	Zeb1	88	59.375