EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0025600 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 221599 bases
Position: chr2:66101183-66322781
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0054631	RRM_1	PF00076.22	1.4e-32	1	2
MGP_NODShiLtJ_P0054631	RRM_1	PF00076.22	1.4e-32	2	2
MGP_NODShiLtJ_P0054629	RRM_1	PF00076.22	1.7e-32	1	2
MGP_NODShiLtJ_P0054629	RRM_1	PF00076.22	1.7e-32	2	2
MGP_NODShiLtJ_P0054630	RRM_1	PF00076.22	1.8e-32	1	2
MGP_NODShiLtJ_P0054630	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0054631	-	1753	-	MGP_NODShiLtJ_P0054631	386 (aa)	-	-
MGP_NODShiLtJ_T0054630	-	2472	-	MGP_NODShiLtJ_P0054630	417 (aa)	-	-
MGP_NODShiLtJ_T0054633	-	757	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054632	-	644	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054635	-	217	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054634	-	224	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054637	-	123	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054636	-	202	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0054629	-	4359	XM_006499940	MGP_NODShiLtJ_P0054629	403 (aa)	XP_006500003	Q91W59

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0025600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0025600	Rbms1	96	71.538	MGP_NODShiLtJ_G0035199	Rbms3	99	80.841
MGP_NODShiLtJ_G0025600	Rbms1	51	33.645	MGP_NODShiLtJ_G0034273	Elavl3	50	36.207
MGP_NODShiLtJ_G0025600	Rbms1	99	66.753	MGP_NODShiLtJ_G0017710	Rbms2	86	71.758
MGP_NODShiLtJ_G0025600	Rbms1	51	37.209	MGP_NODShiLtJ_G0028254	Elavl2	60	41.558
MGP_NODShiLtJ_G0025600	Rbms1	53	32.773	MGP_NODShiLtJ_G0028383	Elavl4	70	36.458