EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0025961 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 84372 bases
Position: chr2:101779469-101863840
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0055700	RRM_1	PF00076.22	4e-52	1	3
MGP_NODShiLtJ_P0055700	RRM_1	PF00076.22	4e-52	2	3
MGP_NODShiLtJ_P0055700	RRM_1	PF00076.22	4e-52	3	3
MGP_NODShiLtJ_P0055694	RRM_1	PF00076.22	4.2e-52	1	3
MGP_NODShiLtJ_P0055694	RRM_1	PF00076.22	4.2e-52	2	3
MGP_NODShiLtJ_P0055694	RRM_1	PF00076.22	4.2e-52	3	3
MGP_NODShiLtJ_P0055699	RRM_1	PF00076.22	5.2e-52	1	3
MGP_NODShiLtJ_P0055699	RRM_1	PF00076.22	5.2e-52	2	3
MGP_NODShiLtJ_P0055699	RRM_1	PF00076.22	5.2e-52	3	3
MGP_NODShiLtJ_P0055697	RRM_1	PF00076.22	6.7e-52	1	3
MGP_NODShiLtJ_P0055697	RRM_1	PF00076.22	6.7e-52	2	3
MGP_NODShiLtJ_P0055697	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0055700	-	4430	-	MGP_NODShiLtJ_P0055700	483 (aa)	-	-
MGP_NODShiLtJ_T0055701	-	486	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0055693	-	350	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0055694	-	7849	-	MGP_NODShiLtJ_P0055694	487 (aa)	-	-
MGP_NODShiLtJ_T0055695	-	426	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0055696	-	478	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0055697	-	7006	-	MGP_NODShiLtJ_P0055697	543 (aa)	-	-
MGP_NODShiLtJ_T0055698	-	271	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0055699	-	7577	-	MGP_NODShiLtJ_P0055699	513 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0025961	Celf1	52	35.526	MGP_NODShiLtJ_G0022964	Pabpc6	53	35.526
MGP_NODShiLtJ_G0025961	Celf1	98	44.650	MGP_NODShiLtJ_G0017421	Celf5	73	59.859
MGP_NODShiLtJ_G0025961	Celf1	53	43.421	MGP_NODShiLtJ_G0035199	Rbms3	68	43.421
MGP_NODShiLtJ_G0025961	Celf1	97	43.320	MGP_NODShiLtJ_G0027371	Celf3	99	43.830
MGP_NODShiLtJ_G0025961	Celf1	62	40.741	MGP_NODShiLtJ_G0028383	Elavl4	78	40.741
MGP_NODShiLtJ_G0025961	Celf1	57	37.879	MGP_NODShiLtJ_G0027002	Pabpc4l	65	34.211
MGP_NODShiLtJ_G0025961	Celf1	70	38.636	MGP_NODShiLtJ_G0028543	Pabpc4	88	32.258
MGP_NODShiLtJ_G0025961	Celf1	100	80.082	MGP_NODShiLtJ_G0025170	Celf2	100	88.060
MGP_NODShiLtJ_G0025961	Celf1	69	41.975	MGP_NODShiLtJ_G0028254	Elavl2	85	41.975
MGP_NODShiLtJ_G0025961	Celf1	98	45.135	MGP_NODShiLtJ_G0034700	Celf6	91	45.549
MGP_NODShiLtJ_G0025961	Celf1	61	45.679	MGP_NODShiLtJ_G0033137	Elavl1	83	45.679
MGP_NODShiLtJ_G0025961	Celf1	100	45.200	MGP_NODShiLtJ_G0024036	Celf4	100	42.430
MGP_NODShiLtJ_G0025961	Celf1	57	43.590	MGP_NODShiLtJ_G0034273	Elavl3	71	42.391