EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0026031 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 48536 bases
Position: chr2:116954738-117003273
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0056134	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_NODShiLtJ_P0056135	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_NODShiLtJ_P0056136	Caprin-1_C	PF12287.8	3.2e-90	1	1
MGP_NODShiLtJ_P0056141	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_NODShiLtJ_P0056137	Caprin-1_C	PF12287.8	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0056138	-	816	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056139	-	937	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056134	-	6169	XM_006499902	MGP_NODShiLtJ_P0056134	707 (aa)	XP_006499965	Q60865
MGP_NODShiLtJ_T0056135	-	4069	-	MGP_NODShiLtJ_P0056135	707 (aa)	-	-
MGP_NODShiLtJ_T0056136	-	1923	-	MGP_NODShiLtJ_P0056136	213 (aa)	-	-
MGP_NODShiLtJ_T0056137	-	856	-	MGP_NODShiLtJ_P0056137	93 (aa)	-	-
MGP_NODShiLtJ_T0056141	-	760	-	MGP_NODShiLtJ_P0056141	253 (aa)	-	-
MGP_NODShiLtJ_T0056140	-	809	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056143	-	478	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056142	-	570	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056145	-	555	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056144	-	879	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056147	-	391	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056146	-	828	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0056148	-	626	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026031	Caprin1	89	44.275	MGP_NODShiLtJ_G0031317	Caprin2	91	38.415