EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0026391 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 9814 bases
Position: chr2:161247411-161257224
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0057673	RRM_5	PF13893.6	8.4e-07	1	2
MGP_NODShiLtJ_P0057673	RRM_5	PF13893.6	8.4e-07	2	2
MGP_NODShiLtJ_P0057673	RRM_1	PF00076.22	2.9e-25	1	2
MGP_NODShiLtJ_P0057673	RRM_1	PF00076.22	2.9e-25	2	2
MGP_NODShiLtJ_P0057675	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0057674	-	686	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0057675	-	636	-	MGP_NODShiLtJ_P0057675	143 (aa)	-	-
MGP_NODShiLtJ_T0057676	-	594	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0057677	-	1827	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0057673	-	2061	-	MGP_NODShiLtJ_P0057673	225 (aa)	-	Q9CQI7

Gene Model

Click here to download MGP_NODShiLtJ_G0026391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026391	Snrpb2	99	63.121	MGP_NODShiLtJ_G0031715	Snrpa	96	51.055
MGP_NODShiLtJ_G0026391	Snrpb2	99	62.054	MGP_NODShiLtJ_G0019849	Gm5145	97	62.054