EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0026427 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 13287 bases
Position: chr2:167306711-167319997
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	1	6
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	2	6
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	3	6
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	4	6
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	5	6
MGP_NODShiLtJ_P0057820	zf-C2H2	PF00096.26	3.1e-34	6	6
MGP_NODShiLtJ_P0057820	zf-met	PF12874.7	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0057821	-	701	-	MGP_NODShiLtJ_P0057821	146 (aa)	-	-
MGP_NODShiLtJ_T0057820	-	4234	XM_006500304	MGP_NODShiLtJ_P0057820	706 (aa)	XP_006500367	Q4VBD9
MGP_NODShiLtJ_T0057822	-	734	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026427	Gzf1	59	44.103	MGP_NODShiLtJ_G0029310	Zbtb49	62	46.479
MGP_NODShiLtJ_G0026427	Gzf1	84	34.286	MGP_NODShiLtJ_G0016424	Zbtb41	54	34.286
MGP_NODShiLtJ_G0026427	Gzf1	83	37.118	MGP_NODShiLtJ_G0028853	Zbtb17	78	39.568
MGP_NODShiLtJ_G0026427	Gzf1	55	46.193	MGP_NODShiLtJ_G0026936	Mynn	58	46.193
MGP_NODShiLtJ_G0026427	Gzf1	64	37.349	MGP_NODShiLtJ_G0035247	Zfp651	51	37.349
MGP_NODShiLtJ_G0026427	Gzf1	60	41.319	MGP_NODShiLtJ_G0020555	Zfp748	94	42.215
MGP_NODShiLtJ_G0026427	Gzf1	66	43.373	MGP_NODShiLtJ_G0026710	Zfp334	66	43.842