EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0026630 (Gene tree)
Gene ID: -
Gene Symbol: Chd6
Alias: 5430439G14Rik|6330406J24Rik|CHD-6|Kiaa1335
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 188893 bases
Position: chr2:180926282-181115174
Accession: 1918639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0058691	ResIII	PF04851.15	4.2e-08	1	1
MGP_NODShiLtJ_P0058687	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0058696	-	675	-	MGP_NODShiLtJ_P0058696	217 (aa)	-	-
MGP_NODShiLtJ_T0058697	-	5051	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058687	-	10515	XM_006500181	MGP_NODShiLtJ_P0058687	2711 (aa)	XP_011238078	A3KFM7
MGP_NODShiLtJ_T0058688	-	729	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058689	-	764	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058695	-	646	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058694	-	616	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058693	-	3092	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058692	-	601	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0058691	-	3608	-	MGP_NODShiLtJ_P0058691	1183 (aa)	-	-
MGP_NODShiLtJ_T0058690	-	3970	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026630	Chd6	61	37.625	MGP_NODShiLtJ_G0032186	Chd2	63	32.583
MGP_NODShiLtJ_G0026630	Chd6	66	36.621	MGP_NODShiLtJ_G0028985	Chd5	51	34.657
MGP_NODShiLtJ_G0026630	Chd6	93	66.068	MGP_NODShiLtJ_G0033732	Chd9	72	62.298
MGP_NODShiLtJ_G0026630	Chd6	84	72.837	MGP_NODShiLtJ_G0027855	Chd7	72	64.905