EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0026724 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 21699 bases
Position: chr2:187655500-187677198
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0059072	ResIII	PF04851.15	1.6e-06	1	1
MGP_NODShiLtJ_P0059072	DEAD	PF00270.29	7.1e-45	1	1
MGP_NODShiLtJ_P0059073	DEAD	PF00270.29	2.3e-18	1	1
MGP_NODShiLtJ_P0059074	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0059074	-	955	-	MGP_NODShiLtJ_P0059074	310 (aa)	-	-
MGP_NODShiLtJ_T0059075	-	264	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059076	-	649	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059077	-	708	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059072	-	2714	XM_006499422	MGP_NODShiLtJ_P0059072	760 (aa)	XP_006499485	Q921N6
MGP_NODShiLtJ_T0059073	-	2151	-	MGP_NODShiLtJ_P0059073	292 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026724	Ddx27	53	31.019	MGP_NODShiLtJ_G0017875	Ddx56	98	33.065
MGP_NODShiLtJ_G0026724	Ddx27	53	44.800	MGP_NODShiLtJ_G0016284	Ddx18	65	45.600
MGP_NODShiLtJ_G0026724	Ddx27	54	31.655	MGP_NODShiLtJ_G0023455	Ddx39b	84	32.970
MGP_NODShiLtJ_G0026724	Ddx27	51	35.938	MGP_NODShiLtJ_G0019905	Ddx24	56	35.938
MGP_NODShiLtJ_G0026724	Ddx27	52	34.129	MGP_NODShiLtJ_G0017163	Ddx50	61	34.272
MGP_NODShiLtJ_G0026724	Ddx27	56	32.558	MGP_NODShiLtJ_G0021907	Ddx17	56	33.880
MGP_NODShiLtJ_G0026724	Ddx27	59	33.696	MGP_NODShiLtJ_G0033504	Ddx49	97	38.177