EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0026836 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 8683 bases
Position: chr2:202942554-202951236
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0059551	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0059560	-	555	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059559	-	434	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059558	-	662	-	MGP_NODShiLtJ_P0059558	62 (aa)	-	-
MGP_NODShiLtJ_T0059553	-	2179	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059552	-	2318	-	MGP_NODShiLtJ_P0059552	121 (aa)	-	-
MGP_NODShiLtJ_T0059551	-	2256	XM_011239965	MGP_NODShiLtJ_P0059551	201 (aa)	XP_011238267	Q8BXL7
MGP_NODShiLtJ_T0059557	-	748	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059556	-	835	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059555	-	1087	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0059554	-	1822	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0026836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0026836	Arfrp1	93	38.938	MGP_NODShiLtJ_G0025570	Arl5a	97	38.587
MGP_NODShiLtJ_G0026836	Arfrp1	93	37.931	MGP_NODShiLtJ_G0022137	Arf3	96	33.333
MGP_NODShiLtJ_G0026836	Arfrp1	91	40.000	MGP_NODShiLtJ_G0019557	Arl4a	90	34.896
MGP_NODShiLtJ_G0026836	Arfrp1	84	35.577	MGP_NODShiLtJ_G0027109	Arl14	83	34.911
MGP_NODShiLtJ_G0026836	Arfrp1	87	32.222	MGP_NODShiLtJ_G0019063	Arl4d	85	32.222
MGP_NODShiLtJ_G0026836	Arfrp1	93	38.793	MGP_NODShiLtJ_G0019124	Arf2	96	33.333
MGP_NODShiLtJ_G0026836	Arfrp1	84	40.196	MGP_NODShiLtJ_G0025204	Arl5b	92	37.126
MGP_NODShiLtJ_G0026836	Arfrp1	71	30.070	MGP_NODShiLtJ_G0016389	Arl8a	73	30.070
MGP_NODShiLtJ_G0026836	Arfrp1	93	40.708	MGP_NODShiLtJ_G0018896	Arl5c	96	37.705
MGP_NODShiLtJ_G0026836	Arfrp1	93	31.304	MGP_NODShiLtJ_G0030909	Arl8b	74	31.724
MGP_NODShiLtJ_G0026836	Arfrp1	85	34.286	MGP_NODShiLtJ_G0016157	Arl4c	86	34.286
MGP_NODShiLtJ_G0026836	Arfrp1	93	33.929	MGP_NODShiLtJ_G0022760	Arl6	92	30.387
MGP_NODShiLtJ_G0026836	Arfrp1	92	40.000	MGP_NODShiLtJ_G0025046	Arl3	96	40.000
MGP_NODShiLtJ_G0026836	Arfrp1	85	36.416	MGP_NODShiLtJ_G0017494	Arl1	97	34.921
MGP_NODShiLtJ_G0026836	Arfrp1	90	38.393	MGP_NODShiLtJ_G0030316	Arf5	94	34.225
MGP_NODShiLtJ_G0026836	Arfrp1	91	38.182	MGP_NODShiLtJ_G0024579	Arl2	97	35.106
MGP_NODShiLtJ_G0026836	Arfrp1	87	37.273	MGP_NODShiLtJ_G0021278	Arl11	94	34.659