EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0026962 (Gene tree)
Gene ID
-
Gene Symbol
Fxr1
Alias
1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p
Full Name
fragile X mental retardation gene 1%2C autosomal homolog
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Plus strand
Length
56914 bases
Position
chr3:36618875-36675788
Accession
104860
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0060136KH_1PF00013.296.1e-1712
MGP_NODShiLtJ_P0060136KH_1PF00013.296.1e-1722
MGP_NODShiLtJ_P0060133KH_1PF00013.299.3e-1712
MGP_NODShiLtJ_P0060133KH_1PF00013.299.3e-1722
MGP_NODShiLtJ_P0060134KH_1PF00013.291.1e-1612
MGP_NODShiLtJ_P0060134KH_1PF00013.291.1e-1622
MGP_NODShiLtJ_P0060132KH_1PF00013.291.3e-1612
MGP_NODShiLtJ_P0060132KH_1PF00013.291.3e-1622
MGP_NODShiLtJ_P0060131KH_1PF00013.291.7e-1612
MGP_NODShiLtJ_P0060131KH_1PF00013.291.7e-1622
MGP_NODShiLtJ_P0060133AgenetPF05641.126.6e-1111
MGP_NODShiLtJ_P0060134AgenetPF05641.127.7e-1111
MGP_NODShiLtJ_P0060132AgenetPF05641.121e-1011
MGP_NODShiLtJ_P0060131AgenetPF05641.121.3e-1011
MGP_NODShiLtJ_P0060134FXMRP1_C_corePF12235.83e-4611
MGP_NODShiLtJ_P0060131FXMRP1_C_corePF12235.83.6e-4611
MGP_NODShiLtJ_P0060136FXMRP1_C_corePF12235.83.1e-2912
MGP_NODShiLtJ_P0060136FXMRP1_C_corePF12235.83.1e-2922
MGP_NODShiLtJ_P0060133FXMRP1_C_corePF12235.88.3e-2912
MGP_NODShiLtJ_P0060133FXMRP1_C_corePF12235.88.3e-2922
MGP_NODShiLtJ_P0060132FXMRP1_C_corePF12235.87.1e-2812
MGP_NODShiLtJ_P0060132FXMRP1_C_corePF12235.87.1e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0060131-2377XM_006535400MGP_NODShiLtJ_P0060131671 (aa)XP_006535463Q61584
MGP_NODShiLtJ_T0060133-2869-MGP_NODShiLtJ_P0060133533 (aa)--
MGP_NODShiLtJ_T0060132-2107-MGP_NODShiLtJ_P0060132615 (aa)--
MGP_NODShiLtJ_T0060135-2126-MGP_NODShiLtJ_P006013548 (aa)--
MGP_NODShiLtJ_T0060134-2102-MGP_NODShiLtJ_P0060134562 (aa)--
MGP_NODShiLtJ_T0060137-651--- (aa)--
MGP_NODShiLtJ_T0060136-1954-MGP_NODShiLtJ_P0060136454 (aa)--
MGP_NODShiLtJ_T0060139-2489--- (aa)--
MGP_NODShiLtJ_T0060138-646-MGP_NODShiLtJ_P0060138132 (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0026962's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0026962's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0026962Fxr17965.000MGP_NODShiLtJ_G0035559Fmr18165.142
MGP_NODShiLtJ_G0026962Fxr19765.823MGP_NODShiLtJ_G0018390Fxr29662.110

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