EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027367 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 22795 bases
Position: chr3:108301464-108324258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0061884	KH_1	PF00013.29	1.4e-34	1	2
MGP_NODShiLtJ_P0061884	KH_1	PF00013.29	1.4e-34	2	2
MGP_NODShiLtJ_P0061886	KH_1	PF00013.29	2e-34	1	2
MGP_NODShiLtJ_P0061886	KH_1	PF00013.29	2e-34	2	2
MGP_NODShiLtJ_P0061883	KH_1	PF00013.29	1.3e-33	1	2
MGP_NODShiLtJ_P0061883	KH_1	PF00013.29	1.3e-33	2	2
MGP_NODShiLtJ_P0061887	KH_1	PF00013.29	1.3e-33	1	2
MGP_NODShiLtJ_P0061887	KH_1	PF00013.29	1.3e-33	2	2
MGP_NODShiLtJ_P0061888	KH_1	PF00013.29	1.3e-33	1	2
MGP_NODShiLtJ_P0061888	KH_1	PF00013.29	1.3e-33	2	2
MGP_NODShiLtJ_P0061890	KH_1	PF00013.29	6.1e-28	1	2
MGP_NODShiLtJ_P0061890	KH_1	PF00013.29	6.1e-28	2	2
MGP_NODShiLtJ_P0061889	KH_1	PF00013.29	3.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0061888	-	2652	-	MGP_NODShiLtJ_P0061888	562 (aa)	-	-
MGP_NODShiLtJ_T0061889	-	2486	-	MGP_NODShiLtJ_P0061889	517 (aa)	-	-
MGP_NODShiLtJ_T0061886	-	1239	-	MGP_NODShiLtJ_P0061886	299 (aa)	-	-
MGP_NODShiLtJ_T0061887	-	2662	-	MGP_NODShiLtJ_P0061887	562 (aa)	-	-
MGP_NODShiLtJ_T0061884	-	912	-	MGP_NODShiLtJ_P0061884	266 (aa)	-	-
MGP_NODShiLtJ_T0061885	-	476	-	MGP_NODShiLtJ_P0061885	50 (aa)	-	-
MGP_NODShiLtJ_T0061883	-	5712	-	MGP_NODShiLtJ_P0061883	562 (aa)	-	-
MGP_NODShiLtJ_T0061890	-	2596	-	MGP_NODShiLtJ_P0061890	558 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0027367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027367	-	56	30.625	MGP_NODShiLtJ_G0030525	Igf2bp3	55	30.625
MGP_NODShiLtJ_G0027367	-	77	31.707	MGP_NODShiLtJ_G0025424	Fubp3	71	31.707