EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027371 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 16785 bases
Position: chr3:108372167-108388951
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0061908	RRM_1	PF00076.22	9.2e-54	1	3
MGP_NODShiLtJ_P0061908	RRM_1	PF00076.22	9.2e-54	2	3
MGP_NODShiLtJ_P0061908	RRM_1	PF00076.22	9.2e-54	3	3
MGP_NODShiLtJ_P0061907	RRM_1	PF00076.22	1.5e-53	1	3
MGP_NODShiLtJ_P0061907	RRM_1	PF00076.22	1.5e-53	2	3
MGP_NODShiLtJ_P0061907	RRM_1	PF00076.22	1.5e-53	3	3
MGP_NODShiLtJ_P0061906	RRM_1	PF00076.22	2e-53	1	3
MGP_NODShiLtJ_P0061906	RRM_1	PF00076.22	2e-53	2	3
MGP_NODShiLtJ_P0061906	RRM_1	PF00076.22	2e-53	3	3
MGP_NODShiLtJ_P0061909	RRM_1	PF00076.22	6.1e-41	1	3
MGP_NODShiLtJ_P0061909	RRM_1	PF00076.22	6.1e-41	2	3
MGP_NODShiLtJ_P0061909	RRM_1	PF00076.22	6.1e-41	3	3
MGP_NODShiLtJ_P0061914	RRM_1	PF00076.22	6.8e-16	1	1
MGP_NODShiLtJ_P0061915	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0061916	-	3354	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061917	-	889	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061910	-	1193	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061911	-	669	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061912	-	2444	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061913	-	2935	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0061914	-	779	-	MGP_NODShiLtJ_P0061914	182 (aa)	-	-
MGP_NODShiLtJ_T0061915	-	726	-	MGP_NODShiLtJ_P0061915	231 (aa)	-	-
MGP_NODShiLtJ_T0061909	-	1536	-	MGP_NODShiLtJ_P0061909	511 (aa)	-	-
MGP_NODShiLtJ_T0061908	-	2354	-	MGP_NODShiLtJ_P0061908	416 (aa)	-	-
MGP_NODShiLtJ_T0061907	-	2747	-	MGP_NODShiLtJ_P0061907	465 (aa)	-	-
MGP_NODShiLtJ_T0061906	-	3176	-	MGP_NODShiLtJ_P0061906	494 (aa)	-	-
MGP_NODShiLtJ_T0061905	-	365	XM_006502323	MGP_NODShiLtJ_P0061905	31 (aa)	XP_006502386	Q8CIN6
MGP_NODShiLtJ_T0061918	-	855	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0027371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027371	Celf3	70	34.091	MGP_NODShiLtJ_G0032890	Tial1	81	37.333
MGP_NODShiLtJ_G0027371	Celf3	99	43.830	MGP_NODShiLtJ_G0025961	Celf1	97	43.320
MGP_NODShiLtJ_G0027371	Celf3	63	41.975	MGP_NODShiLtJ_G0028254	Elavl2	76	41.975
MGP_NODShiLtJ_G0027371	Celf3	67	32.857	MGP_NODShiLtJ_G0026654	Pabpc1l	57	34.118
MGP_NODShiLtJ_G0027371	Celf3	91	39.474	MGP_NODShiLtJ_G0035199	Rbms3	76	39.474
MGP_NODShiLtJ_G0027371	Celf3	100	66.848	MGP_NODShiLtJ_G0017421	Celf5	100	65.032
MGP_NODShiLtJ_G0027371	Celf3	100	69.072	MGP_NODShiLtJ_G0024036	Celf4	97	65.971
MGP_NODShiLtJ_G0027371	Celf3	77	37.805	MGP_NODShiLtJ_G0030780	Tia1	93	38.667
MGP_NODShiLtJ_G0027371	Celf3	90	55.801	MGP_NODShiLtJ_G0025170	Celf2	94	83.333
MGP_NODShiLtJ_G0027371	Celf3	98	35.632	MGP_NODShiLtJ_G0034273	Elavl3	89	34.940
MGP_NODShiLtJ_G0027371	Celf3	69	33.784	MGP_NODShiLtJ_G0028543	Pabpc4	50	32.394
MGP_NODShiLtJ_G0027371	Celf3	81	87.368	MGP_NODShiLtJ_G0034700	Celf6	75	85.526
MGP_NODShiLtJ_G0027371	Celf3	91	35.616	MGP_NODShiLtJ_G0021633	Pabpc1	62	36.585
MGP_NODShiLtJ_G0027371	Celf3	80	37.500	MGP_NODShiLtJ_G0022964	Pabpc6	57	37.500
MGP_NODShiLtJ_G0027371	Celf3	98	35.632	MGP_NODShiLtJ_G0033137	Elavl1	95	44.444
MGP_NODShiLtJ_G0027371	Celf3	61	40.741	MGP_NODShiLtJ_G0028383	Elavl4	85	40.741