EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027441 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 3865 bases
Position: chr3:110864376-110868240
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0062268	RRM_1	PF00076.22	5.2e-18	1	1
MGP_NODShiLtJ_P0062267	RRM_1	PF00076.22	5.5e-18	1	1
MGP_NODShiLtJ_P0062269	RRM_1	PF00076.22	5.6e-18	1	1
MGP_NODShiLtJ_P0062267	RRM_3	PF08777.11	3.7e-06	1	1
MGP_NODShiLtJ_P0062269	RRM_3	PF08777.11	3.8e-06	1	1
MGP_NODShiLtJ_P0062268	RRM_3	PF08777.11	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0062270	-	464	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0062269	-	525	-	MGP_NODShiLtJ_P0062269	174 (aa)	-	-
MGP_NODShiLtJ_T0062268	-	2763	-	MGP_NODShiLtJ_P0062268	171 (aa)	-	-
MGP_NODShiLtJ_T0062267	-	2614	-	MGP_NODShiLtJ_P0062267	173 (aa)	-	Q9CWZ3
MGP_NODShiLtJ_T0062271	-	560	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027441	Rbm8a	62	30.693	MGP_NODShiLtJ_G0028383	Elavl4	54	33.784
MGP_NODShiLtJ_G0027441	Rbm8a	58	32.353	MGP_NODShiLtJ_G0028254	Elavl2	59	33.784
MGP_NODShiLtJ_G0027441	Rbm8a	57	31.313	MGP_NODShiLtJ_G0035535	Rbmx	73	32.000
MGP_NODShiLtJ_G0027441	Rbm8a	54	35.870	MGP_NODShiLtJ_G0030780	Tia1	77	35.870
MGP_NODShiLtJ_G0027441	Rbm8a	62	32.000	MGP_NODShiLtJ_G0033137	Elavl1	74	32.000