EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027458 (Gene tree)
Gene ID: -
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Alc1|Snf2p
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 53463 bases
Position: chr3:111908663-111962125
Accession: 1915308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0062348	ResIII	PF04851.15	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0062348	-	3008	XM_017319700	MGP_NODShiLtJ_P0062348	900 (aa)	XP_017175189	Q9CXF7
MGP_NODShiLtJ_T0062349	-	2679	-	MGP_NODShiLtJ_P0062349	892 (aa)	-	-
MGP_NODShiLtJ_T0062351	-	2941	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0062350	-	501	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0027458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027458	Chd1l	59	43.831	MGP_NODShiLtJ_G0035472	Smarca1	85	42.908
MGP_NODShiLtJ_G0027458	Chd1l	50	30.584	MGP_NODShiLtJ_G0028424	Rad54l	69	30.361
MGP_NODShiLtJ_G0027458	Chd1l	50	30.724	MGP_NODShiLtJ_G0027868	Rad54b	56	30.196
MGP_NODShiLtJ_G0027458	Chd1l	50	32.657	MGP_NODShiLtJ_G0020511	Ercc6l2	81	30.021