EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027790 (Gene tree)
Gene ID: -
Gene Symbol: Rpf1
Alias: 2210420E24Rik|2310066N05Rik|Bxdc5
Full Name: ribosome production factor 1 homolog
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 16494 bases
Position: chr3:168840002-168856495
Accession: 1917535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0063905	Brix	PF04427.18	8.3e-26	1	1
MGP_NODShiLtJ_P0063906	Brix	PF04427.18	6.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0063909	-	1978	-	MGP_NODShiLtJ_P0063909	212 (aa)	-	-
MGP_NODShiLtJ_T0063908	-	807	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0063905	-	1661	XM_006502050	MGP_NODShiLtJ_P0063905	349 (aa)	XP_006502113	Q7TND5
MGP_NODShiLtJ_T0063907	-	813	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0063906	-	1120	-	MGP_NODShiLtJ_P0063906	146 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027790	Rpf1	87	40.625	MGP_NODShiLtJ_G0015774	Imp4	71	37.321