EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0027876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 20209 bases
Position: chr4:9644120-9664328
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0064412	RRM_1	PF00076.22	9.2e-33	1	3
MGP_NODShiLtJ_P0064412	RRM_1	PF00076.22	9.2e-33	2	3
MGP_NODShiLtJ_P0064412	RRM_1	PF00076.22	9.2e-33	3	3
MGP_NODShiLtJ_P0064413	RRM_1	PF00076.22	9.2e-33	1	3
MGP_NODShiLtJ_P0064413	RRM_1	PF00076.22	9.2e-33	2	3
MGP_NODShiLtJ_P0064413	RRM_1	PF00076.22	9.2e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0064412	-	2950	-	MGP_NODShiLtJ_P0064412	806 (aa)	-	-
MGP_NODShiLtJ_T0064413	-	3130	-	MGP_NODShiLtJ_P0064413	806 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0027876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0027876	-	100	96.364	MGP_NODShiLtJ_G0027875	Rbm12b2	100	96.364
MGP_NODShiLtJ_G0027876	-	51	33.333	MGP_NODShiLtJ_G0018101	Hnrnph1	78	33.333
MGP_NODShiLtJ_G0027876	-	70	71.264	MGP_NODShiLtJ_G0026577	Rbm12	56	71.264