EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0027955 (Gene tree)
Gene ID
-
Gene Symbol
Ddx58
Alias
6430573D20Rik|C330021E21|RIG-I|RLR-1
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Minus strand
Length
39450 bases
Position
chr4:44193757-44233206
Accession
2442858
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0064716ResIIIPF04851.153.2e-1711
MGP_NODShiLtJ_P0064713ResIIIPF04851.155.4e-1711
MGP_NODShiLtJ_P0064713RIG-I_C-RDPF11648.84.8e-3511
MGP_NODShiLtJ_P0064716DEADPF00270.291.3e-1611
MGP_NODShiLtJ_P0064713DEADPF00270.292.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0064715-756--- (aa)--
MGP_NODShiLtJ_T0064714-402--- (aa)--
MGP_NODShiLtJ_T0064717-1641--- (aa)--
MGP_NODShiLtJ_T0064716-2127-MGP_NODShiLtJ_P0064716707 (aa)--
MGP_NODShiLtJ_T0064711-386--- (aa)--
MGP_NODShiLtJ_T0064713-3874-MGP_NODShiLtJ_P0064713926 (aa)--
MGP_NODShiLtJ_T0064712-3533--- (aa)--
MGP_NODShiLtJ_T0064719-541--- (aa)--
MGP_NODShiLtJ_T0064718-1250--- (aa)--
MGP_NODShiLtJ_T0064720-1607--- (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0027955's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0027955's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0027955Ddx587235.010MGP_NODShiLtJ_G0019017Dhx589732.468
MGP_NODShiLtJ_G0027955Ddx589830.691MGP_NODShiLtJ_G0025608Ifih19730.691

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