EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028254 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 155525 bases
Position: chr4:102799064-102954588
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0065950	RRM_5	PF13893.6	1.3e-12	1	2
MGP_NODShiLtJ_P0065950	RRM_5	PF13893.6	1.3e-12	2	2
MGP_NODShiLtJ_P0065948	RRM_5	PF13893.6	1.4e-12	1	2
MGP_NODShiLtJ_P0065948	RRM_5	PF13893.6	1.4e-12	2	2
MGP_NODShiLtJ_P0065951	RRM_5	PF13893.6	1.7e-12	1	2
MGP_NODShiLtJ_P0065951	RRM_5	PF13893.6	1.7e-12	2	2
MGP_NODShiLtJ_P0065949	RRM_5	PF13893.6	1.9e-12	1	2
MGP_NODShiLtJ_P0065949	RRM_5	PF13893.6	1.9e-12	2	2
MGP_NODShiLtJ_P0065954	RRM_5	PF13893.6	2.1e-12	1	2
MGP_NODShiLtJ_P0065954	RRM_5	PF13893.6	2.1e-12	2	2
MGP_NODShiLtJ_P0065953	RRM_5	PF13893.6	2.2e-12	1	2
MGP_NODShiLtJ_P0065953	RRM_5	PF13893.6	2.2e-12	2	2
MGP_NODShiLtJ_P0065950	RRM_1	PF00076.22	1.2e-66	1	3
MGP_NODShiLtJ_P0065950	RRM_1	PF00076.22	1.2e-66	2	3
MGP_NODShiLtJ_P0065950	RRM_1	PF00076.22	1.2e-66	3	3
MGP_NODShiLtJ_P0065948	RRM_1	PF00076.22	1.4e-66	1	3
MGP_NODShiLtJ_P0065948	RRM_1	PF00076.22	1.4e-66	2	3
MGP_NODShiLtJ_P0065948	RRM_1	PF00076.22	1.4e-66	3	3
MGP_NODShiLtJ_P0065951	RRM_1	PF00076.22	1.6e-66	1	3
MGP_NODShiLtJ_P0065951	RRM_1	PF00076.22	1.6e-66	2	3
MGP_NODShiLtJ_P0065951	RRM_1	PF00076.22	1.6e-66	3	3
MGP_NODShiLtJ_P0065949	RRM_1	PF00076.22	1.7e-66	1	3
MGP_NODShiLtJ_P0065949	RRM_1	PF00076.22	1.7e-66	2	3
MGP_NODShiLtJ_P0065949	RRM_1	PF00076.22	1.7e-66	3	3
MGP_NODShiLtJ_P0065953	RRM_1	PF00076.22	2e-66	1	3
MGP_NODShiLtJ_P0065953	RRM_1	PF00076.22	2e-66	2	3
MGP_NODShiLtJ_P0065953	RRM_1	PF00076.22	2e-66	3	3
MGP_NODShiLtJ_P0065954	RRM_1	PF00076.22	2e-66	1	3
MGP_NODShiLtJ_P0065954	RRM_1	PF00076.22	2e-66	2	3
MGP_NODShiLtJ_P0065954	RRM_1	PF00076.22	2e-66	3	3
MGP_NODShiLtJ_P0065956	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0065950	-	3671	-	MGP_NODShiLtJ_P0065950	347 (aa)	-	-
MGP_NODShiLtJ_T0065951	-	3840	-	MGP_NODShiLtJ_P0065951	373 (aa)	-	-
MGP_NODShiLtJ_T0065952	-	930	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0065953	-	1167	-	MGP_NODShiLtJ_P0065953	388 (aa)	-	-
MGP_NODShiLtJ_T0065954	-	1282	-	MGP_NODShiLtJ_P0065954	389 (aa)	-	-
MGP_NODShiLtJ_T0065955	-	3195	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0065949	-	3797	-	MGP_NODShiLtJ_P0065949	376 (aa)	-	-
MGP_NODShiLtJ_T0065948	-	3730	XM_006502778	MGP_NODShiLtJ_P0065948	360 (aa)	XP_006502841	Q60899
MGP_NODShiLtJ_T0065958	-	511	-	MGP_NODShiLtJ_P0065958	23 (aa)	-	-
MGP_NODShiLtJ_T0065959	-	450	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0065957	-	408	-	MGP_NODShiLtJ_P0065957	83 (aa)	-	-
MGP_NODShiLtJ_T0065956	-	425	-	MGP_NODShiLtJ_P0065956	125 (aa)	-	-
MGP_NODShiLtJ_T0065960	-	415	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0028254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028254	Elavl2	63	32.911	MGP_NODShiLtJ_G0035337	Rbm3	82	38.710
MGP_NODShiLtJ_G0028254	Elavl2	100	79.292	MGP_NODShiLtJ_G0034273	Elavl3	100	78.400
MGP_NODShiLtJ_G0028254	Elavl2	92	34.940	MGP_NODShiLtJ_G0026654	Pabpc1l	64	34.940
MGP_NODShiLtJ_G0028254	Elavl2	60	41.558	MGP_NODShiLtJ_G0025600	Rbms1	51	37.209
MGP_NODShiLtJ_G0028254	Elavl2	67	35.714	MGP_NODShiLtJ_G0029897	Snrnp35	60	37.500
MGP_NODShiLtJ_G0028254	Elavl2	93	34.615	MGP_NODShiLtJ_G0032890	Tial1	72	34.615
MGP_NODShiLtJ_G0028254	Elavl2	89	34.940	MGP_NODShiLtJ_G0027002	Pabpc4l	96	34.940
MGP_NODShiLtJ_G0028254	Elavl2	58	31.169	MGP_NODShiLtJ_G0029581	Hnrnpd	70	32.000
MGP_NODShiLtJ_G0028254	Elavl2	72	32.632	MGP_NODShiLtJ_G0018774	Msi2	70	31.250
MGP_NODShiLtJ_G0028254	Elavl2	96	34.615	MGP_NODShiLtJ_G0030780	Tia1	89	34.615
MGP_NODShiLtJ_G0028254	Elavl2	89	37.037	MGP_NODShiLtJ_G0035822	Pabpc5	94	37.037
MGP_NODShiLtJ_G0028254	Elavl2	85	30.702	MGP_NODShiLtJ_G0017710	Rbms2	53	37.500
MGP_NODShiLtJ_G0028254	Elavl2	59	33.784	MGP_NODShiLtJ_G0027441	Rbm8a	58	32.353
MGP_NODShiLtJ_G0028254	Elavl2	90	37.349	MGP_NODShiLtJ_G0022964	Pabpc6	60	37.349
MGP_NODShiLtJ_G0028254	Elavl2	97	30.857	MGP_NODShiLtJ_G0017421	Celf5	97	30.857
MGP_NODShiLtJ_G0028254	Elavl2	69	37.209	MGP_NODShiLtJ_G0035199	Rbms3	83	37.222
MGP_NODShiLtJ_G0028254	Elavl2	76	41.975	MGP_NODShiLtJ_G0027371	Celf3	63	41.975
MGP_NODShiLtJ_G0028254	Elavl2	83	39.506	MGP_NODShiLtJ_G0025170	Celf2	87	33.333
MGP_NODShiLtJ_G0028254	Elavl2	64	37.500	MGP_NODShiLtJ_G0017347	Cirbp	76	37.500
MGP_NODShiLtJ_G0028254	Elavl2	66	30.952	MGP_NODShiLtJ_G0028672	Trnau1ap	98	30.952
MGP_NODShiLtJ_G0028254	Elavl2	89	34.940	MGP_NODShiLtJ_G0028543	Pabpc4	99	32.576
MGP_NODShiLtJ_G0028254	Elavl2	89	36.145	MGP_NODShiLtJ_G0024199	Pabpc2	59	36.145
MGP_NODShiLtJ_G0028254	Elavl2	73	34.831	MGP_NODShiLtJ_G0035535	Rbmx	86	34.831
MGP_NODShiLtJ_G0028254	Elavl2	100	89.751	MGP_NODShiLtJ_G0028383	Elavl4	99	89.315
MGP_NODShiLtJ_G0028254	Elavl2	85	41.975	MGP_NODShiLtJ_G0025961	Celf1	69	41.975
MGP_NODShiLtJ_G0028254	Elavl2	78	40.741	MGP_NODShiLtJ_G0034700	Celf6	89	37.037
MGP_NODShiLtJ_G0028254	Elavl2	89	37.349	MGP_NODShiLtJ_G0021633	Pabpc1	52	37.349
MGP_NODShiLtJ_G0028254	Elavl2	89	76.375	MGP_NODShiLtJ_G0033137	Elavl1	94	76.375
MGP_NODShiLtJ_G0028254	Elavl2	88	39.506	MGP_NODShiLtJ_G0024036	Celf4	91	37.037