EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028383 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 168447 bases
Position: chr4:123981090-124149536
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0066591	RRM_5	PF13893.6	2.8e-13	1	2
MGP_NODShiLtJ_P0066591	RRM_5	PF13893.6	2.8e-13	2	2
MGP_NODShiLtJ_P0066589	RRM_5	PF13893.6	3.1e-13	1	2
MGP_NODShiLtJ_P0066589	RRM_5	PF13893.6	3.1e-13	2	2
MGP_NODShiLtJ_P0066594	RRM_5	PF13893.6	3.2e-13	1	2
MGP_NODShiLtJ_P0066594	RRM_5	PF13893.6	3.2e-13	2	2
MGP_NODShiLtJ_P0066593	RRM_5	PF13893.6	3.4e-13	1	2
MGP_NODShiLtJ_P0066593	RRM_5	PF13893.6	3.4e-13	2	2
MGP_NODShiLtJ_P0066595	RRM_5	PF13893.6	3.6e-13	1	2
MGP_NODShiLtJ_P0066595	RRM_5	PF13893.6	3.6e-13	2	2
MGP_NODShiLtJ_P0066592	RRM_5	PF13893.6	3.9e-13	1	2
MGP_NODShiLtJ_P0066592	RRM_5	PF13893.6	3.9e-13	2	2
MGP_NODShiLtJ_P0066590	RRM_5	PF13893.6	3.9e-13	1	2
MGP_NODShiLtJ_P0066590	RRM_5	PF13893.6	3.9e-13	2	2
MGP_NODShiLtJ_P0066591	RRM_1	PF00076.22	2.1e-65	1	3
MGP_NODShiLtJ_P0066591	RRM_1	PF00076.22	2.1e-65	2	3
MGP_NODShiLtJ_P0066591	RRM_1	PF00076.22	2.1e-65	3	3
MGP_NODShiLtJ_P0066594	RRM_1	PF00076.22	2.4e-65	1	3
MGP_NODShiLtJ_P0066594	RRM_1	PF00076.22	2.4e-65	2	3
MGP_NODShiLtJ_P0066594	RRM_1	PF00076.22	2.4e-65	3	3
MGP_NODShiLtJ_P0066589	RRM_1	PF00076.22	2.4e-65	1	3
MGP_NODShiLtJ_P0066589	RRM_1	PF00076.22	2.4e-65	2	3
MGP_NODShiLtJ_P0066589	RRM_1	PF00076.22	2.4e-65	3	3
MGP_NODShiLtJ_P0066593	RRM_1	PF00076.22	2.5e-65	1	3
MGP_NODShiLtJ_P0066593	RRM_1	PF00076.22	2.5e-65	2	3
MGP_NODShiLtJ_P0066593	RRM_1	PF00076.22	2.5e-65	3	3
MGP_NODShiLtJ_P0066595	RRM_1	PF00076.22	2.9e-65	1	3
MGP_NODShiLtJ_P0066595	RRM_1	PF00076.22	2.9e-65	2	3
MGP_NODShiLtJ_P0066595	RRM_1	PF00076.22	2.9e-65	3	3
MGP_NODShiLtJ_P0066592	RRM_1	PF00076.22	2.9e-65	1	3
MGP_NODShiLtJ_P0066592	RRM_1	PF00076.22	2.9e-65	2	3
MGP_NODShiLtJ_P0066592	RRM_1	PF00076.22	2.9e-65	3	3
MGP_NODShiLtJ_P0066590	RRM_1	PF00076.22	3e-65	1	3
MGP_NODShiLtJ_P0066590	RRM_1	PF00076.22	3e-65	2	3
MGP_NODShiLtJ_P0066590	RRM_1	PF00076.22	3e-65	3	3
MGP_NODShiLtJ_P0066597	RRM_1	PF00076.22	1.2e-20	1	1
MGP_NODShiLtJ_P0066599	RRM_1	PF00076.22	6.8e-13	1	1
MGP_NODShiLtJ_P0066600	RRM_1	PF00076.22	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0066600	-	488	-	MGP_NODShiLtJ_P0066600	92 (aa)	-	-
MGP_NODShiLtJ_T0066595	-	3988	-	MGP_NODShiLtJ_P0066595	380 (aa)	-	-
MGP_NODShiLtJ_T0066594	-	3739	-	MGP_NODShiLtJ_P0066594	366 (aa)	-	-
MGP_NODShiLtJ_T0066597	-	644	-	MGP_NODShiLtJ_P0066597	137 (aa)	-	-
MGP_NODShiLtJ_T0066596	-	869	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066591	-	3725	-	MGP_NODShiLtJ_P0066591	356 (aa)	-	-
MGP_NODShiLtJ_T0066590	-	4113	-	MGP_NODShiLtJ_P0066590	385 (aa)	-	-
MGP_NODShiLtJ_T0066593	-	4071	-	MGP_NODShiLtJ_P0066593	371 (aa)	-	-
MGP_NODShiLtJ_T0066592	-	3763	-	MGP_NODShiLtJ_P0066592	383 (aa)	-	-
MGP_NODShiLtJ_T0066599	-	663	-	MGP_NODShiLtJ_P0066599	94 (aa)	-	-
MGP_NODShiLtJ_T0066598	-	464	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066589	-	3961	XM_006502793	MGP_NODShiLtJ_P0066589	366 (aa)	XP_006502856	Q61701

Gene Model

Click here to download MGP_NODShiLtJ_G0028383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028383	Elavl4	81	38.272	MGP_NODShiLtJ_G0025170	Celf2	61	38.272
MGP_NODShiLtJ_G0028383	Elavl4	70	36.458	MGP_NODShiLtJ_G0025600	Rbms1	53	32.773
MGP_NODShiLtJ_G0028383	Elavl4	70	35.484	MGP_NODShiLtJ_G0027002	Pabpc4l	96	30.065
MGP_NODShiLtJ_G0028383	Elavl4	85	40.741	MGP_NODShiLtJ_G0027371	Celf3	61	40.741
MGP_NODShiLtJ_G0028383	Elavl4	74	37.500	MGP_NODShiLtJ_G0017421	Celf5	61	38.095
MGP_NODShiLtJ_G0028383	Elavl4	78	40.741	MGP_NODShiLtJ_G0025961	Celf1	62	40.741
MGP_NODShiLtJ_G0028383	Elavl4	88	30.921	MGP_NODShiLtJ_G0028543	Pabpc4	99	32.576
MGP_NODShiLtJ_G0028383	Elavl4	88	34.940	MGP_NODShiLtJ_G0024199	Pabpc2	59	34.940
MGP_NODShiLtJ_G0028383	Elavl4	88	38.272	MGP_NODShiLtJ_G0024036	Celf4	91	35.802
MGP_NODShiLtJ_G0028383	Elavl4	58	31.646	MGP_NODShiLtJ_G0035337	Rbm3	82	38.710
MGP_NODShiLtJ_G0028383	Elavl4	72	35.821	MGP_NODShiLtJ_G0030526	Tra2a	59	37.097
MGP_NODShiLtJ_G0028383	Elavl4	99	79.893	MGP_NODShiLtJ_G0034273	Elavl3	99	80.323
MGP_NODShiLtJ_G0028383	Elavl4	70	36.458	MGP_NODShiLtJ_G0035199	Rbms3	83	37.097
MGP_NODShiLtJ_G0028383	Elavl4	99	89.315	MGP_NODShiLtJ_G0028254	Elavl2	100	89.751
MGP_NODShiLtJ_G0028383	Elavl4	74	33.708	MGP_NODShiLtJ_G0035535	Rbmx	86	33.708
MGP_NODShiLtJ_G0028383	Elavl4	54	33.784	MGP_NODShiLtJ_G0027441	Rbm8a	62	30.693
MGP_NODShiLtJ_G0028383	Elavl4	66	42.373	MGP_NODShiLtJ_G0017353	Dazap1	64	30.275
MGP_NODShiLtJ_G0028383	Elavl4	57	37.037	MGP_NODShiLtJ_G0029897	Snrnp35	59	33.803
MGP_NODShiLtJ_G0028383	Elavl4	89	73.585	MGP_NODShiLtJ_G0033137	Elavl1	98	73.585
MGP_NODShiLtJ_G0028383	Elavl4	88	35.897	MGP_NODShiLtJ_G0032890	Tial1	73	35.897
MGP_NODShiLtJ_G0028383	Elavl4	88	36.145	MGP_NODShiLtJ_G0021633	Pabpc1	52	36.145
MGP_NODShiLtJ_G0028383	Elavl4	70	38.889	MGP_NODShiLtJ_G0017347	Cirbp	84	38.889
MGP_NODShiLtJ_G0028383	Elavl4	85	40.741	MGP_NODShiLtJ_G0034700	Celf6	95	35.802
MGP_NODShiLtJ_G0028383	Elavl4	89	33.735	MGP_NODShiLtJ_G0026654	Pabpc1l	62	33.735
MGP_NODShiLtJ_G0028383	Elavl4	94	35.897	MGP_NODShiLtJ_G0030780	Tia1	98	32.895
MGP_NODShiLtJ_G0028383	Elavl4	88	32.468	MGP_NODShiLtJ_G0022964	Pabpc6	60	32.468
MGP_NODShiLtJ_G0028383	Elavl4	78	30.088	MGP_NODShiLtJ_G0018774	Msi2	84	30.208
MGP_NODShiLtJ_G0028383	Elavl4	83	30.357	MGP_NODShiLtJ_G0017710	Rbms2	52	36.641