EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028424 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 30238 bases
Position: chr4:129794423-129824660
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0066765	ResIII	PF04851.15	2.2e-09	1	1
MGP_NODShiLtJ_P0066766	ResIII	PF04851.15	2.2e-09	1	1
MGP_NODShiLtJ_P0066765	DEAD	PF00270.29	9e-07	1	1
MGP_NODShiLtJ_P0066766	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0066768	-	209	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066769	-	1519	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066766	-	3025	-	MGP_NODShiLtJ_P0066766	747 (aa)	-	-
MGP_NODShiLtJ_T0066767	-	654	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066764	-	4571	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0066765	-	2780	-	MGP_NODShiLtJ_P0066765	747 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028424	Rad54l	88	44.748	MGP_NODShiLtJ_G0027868	Rad54b	76	44.748
MGP_NODShiLtJ_G0028424	Rad54l	69	30.361	MGP_NODShiLtJ_G0027458	Chd1l	50	30.584
MGP_NODShiLtJ_G0028424	Rad54l	62	32.548	MGP_NODShiLtJ_G0035472	Smarca1	69	31.535
MGP_NODShiLtJ_G0028424	Rad54l	66	30.112	MGP_NODShiLtJ_G0030634	Smarcad1	50	30.112