EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028585 (Gene tree)
Gene ID: -
Gene Symbol: Ago1
Alias: Eif2c1|argonaute 1
Full Name: argonaute RISC catalytic subunit 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 33497 bases
Position: chr4:141245903-141279399
Accession: 2446630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0067452	PAZ	PF02170.22	1.7e-28	1	1
MGP_NODShiLtJ_P0067454	PAZ	PF02170.22	6.7e-13	1	1
MGP_NODShiLtJ_P0067454	Piwi	PF02171.17	8.4e-111	1	1
MGP_NODShiLtJ_P0067452	Piwi	PF02171.17	2.2e-110	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0067453	-	3606	-	MGP_NODShiLtJ_P0067453	132 (aa)	-	-
MGP_NODShiLtJ_T0067452	-	7227	XM_006503067	MGP_NODShiLtJ_P0067452	857 (aa)	XP_011238822	Q8CJG1
MGP_NODShiLtJ_T0067456	-	678	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0067455	-	588	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0067454	-	1662	-	MGP_NODShiLtJ_P0067454	553 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028585	Ago1	100	86.257	MGP_NODShiLtJ_G0021754	Ago2	97	83.790
MGP_NODShiLtJ_G0028585	Ago1	100	89.150	MGP_NODShiLtJ_G0028584	Ago3	91	89.796
MGP_NODShiLtJ_G0028585	Ago1	100	84.071	MGP_NODShiLtJ_G0028586	Ago4	99	82.553