EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0028672 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Minus strand
Length
19739 bases
Position
chr4:147470380-147490118
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0067886RRM_1PF00076.229.8e-2712
MGP_NODShiLtJ_P0067886RRM_1PF00076.229.8e-2722
MGP_NODShiLtJ_P0067885RRM_1PF00076.223.3e-1711
MGP_NODShiLtJ_P0067890RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0067887-1791--- (aa)--
MGP_NODShiLtJ_T0067888-650--- (aa)--
MGP_NODShiLtJ_T0067889-1017-MGP_NODShiLtJ_P006788986 (aa)--
MGP_NODShiLtJ_T0067893-663-MGP_NODShiLtJ_P006789349 (aa)--
MGP_NODShiLtJ_T0067885-961XM_011250332MGP_NODShiLtJ_P0067885247 (aa)XP_011248634Q80VC6
MGP_NODShiLtJ_T0067886-1130-MGP_NODShiLtJ_P0067886287 (aa)--
MGP_NODShiLtJ_T0067890-474-MGP_NODShiLtJ_P0067890146 (aa)--
MGP_NODShiLtJ_T0067896-621--- (aa)--
MGP_NODShiLtJ_T0067895-371-MGP_NODShiLtJ_P006789570 (aa)--
MGP_NODShiLtJ_T0067894-679--- (aa)--
MGP_NODShiLtJ_T0067892-553--- (aa)--
MGP_NODShiLtJ_T0067891-600-MGP_NODShiLtJ_P006789147 (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0028672's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028672's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0028672Trnau1ap7930.198MGP_NODShiLtJ_G0030780Tia16031.285
MGP_NODShiLtJ_G0028672Trnau1ap9830.952MGP_NODShiLtJ_G0028254Elavl26630.952
MGP_NODShiLtJ_G0028672Trnau1ap8834.211MGP_NODShiLtJ_G0027002Pabpc4l8931.875
MGP_NODShiLtJ_G0028672Trnau1ap6032.386MGP_NODShiLtJ_G0032890Tial18033.019

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